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Research Output

  • 12 Article
  • 4 Review article
  • 1 Report
  • 1 Conference article in proceeding
2019

Beyond Pathway Analysis: Identification of Active Subnetworks in Rett Syndrome

Miller, R. A., Ehrhart, F., Eijssen, L. M. T., Slenter, D. N., Curfs, L. M. G., Evelo, C. T., Willighagen, E. L. & Kutmon, M., 21 Feb 2019, In : Frontiers in Genetics. 10, 10 p., 59.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen

AstraZeneca-Sanger Drug Combinatio, 17 Jun 2019, In : Nature Communications. 10, 17 p., 2674.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

CyTargetLinker app update: A flexible solution for network extension in Cytoscape

Kutmon, M., Ehrhart, F., Willighagen, E. L., Evelo, C. T. & Coort, S. L., 13 Aug 2019, In : F1000Research. 7, p. 743

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
52 Downloads (Pure)

Prader-Willi syndrome and Angelman syndrome: Visualisation of the molecular pathways for two chromosomal disorders

Ehrhart, F., Janssen, K. J. M., Coort, S. L., Evelo, C. T. & Curfs, L. M. G., 21 Oct 2019, In : World Journal of Biological Psychiatry. 20, 9, p. 670-682 13 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Review and gap analysis: molecular pathways leading to fetal alcohol spectrum disorders

Ehrhart, F., Roozen, S., Verbeek, J., Koek, G., Kok, G., van Kranen, H., Evelo, C. T. & Curfs, L. M. G., 2019, In : Molecular Psychiatry. 24, 1, p. 10-17 8 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
2018

A Data Fusion Pipeline for Generating and Enriching Adverse Outcome Pathway Descriptions

Nymark, P., Rieswijk, L., Ehrhart, F., Jeliazkova, N., Tsiliki, G., Sarimveis, H., Evelo, C. T., Hongisto, V., Kohonen, P., Willighagen, E. & Grafstrom, R. C., Mar 2018, In : Toxicological Sciences. 162, 1, p. 264-275 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
113 Downloads (Pure)

Current developments in the genetics of Rett and Rett-like syndrome

Ehrhart, F., Sangani, N. B. & Curfs, L. M. G., 1 Mar 2018, In : Current Opinion in Psychiatry. 31, 2, p. 103-108 6 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Integration among databases and data sets to support productive nanotechnology: Challenges and recommendations

Karcher, S., Willighagen, E. L., Rumble, J., Ehrhart, F., Evelo, C. T., Fritts, M., Gaheen, S., Harper, S. L., Hoover, M. D., Jeliazkova, N., Lewinski, N., Robinson, R. L. M., Mills, K. C., Mustad, A. P., Thomas, D. G., Tsiliki, G. & Hendren, C. O., 1 Jan 2018, In : NanoImpact. 9, p. 85-101 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Low maternal melatonin level increases autism spectrum disorder risk in children

Braam, W., Ehrhart, F., Maas, A. P. H. M., Smits, M. G. & Curfs, L., 1 Nov 2018, In : Research in Developmental Disabilities. 82, p. 79-89 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

MECP2 variation in Rett syndrome-An overview of current coverage of genetic and phenotype data within existing databases

Townend, G. S., Ehrhart, F., van Kranen, H. J., Wilkinson, M., Jacobsen, A., Roos, M., Willighagen, E. L., van Enckevort, D., Evelo, C. T. & Curfs, L. M. G., Jul 2018, In : Human Mutation. 39, 7, p. 914-924 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data

Kuhn, T., Meroño-Peñuela, A., Malic, A., Poelen, J. H., Hurlbert, A. H., Ortiz, E. C., Furlong, L. I., Queralt-Rosinach, N., Chichester, C., Banda, J. M., Willighagen, E., Ehrhart, F., Evelo, C., Malas, T. B. & Dumontier, M., 18 Sep 2018, 2018 IEEE 14th International Conference on e-Science (e-Science). p. 83-92 10 p. (Proceedings of IEEE e-Science).

Research output: Chapter in Book/Report/Conference proceedingConference article in proceedingAcademic

WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research

Slenter, D. N., Kutmon, M., Hanspers, K., Riutta, A., Windsor, J., Nunes, N., Mélius, J., Cirillo, E., Coort, S. L., Digles, D., Ehrhart, F., Giesbertz, P., Kalafati, M., Martens, M., Miller, R., Nishida, K., Rieswijk, L., Waagmeester, A., Eijssen, L. M. T., Evelo, C. T. & 2 others, Pico, A. R. & Willighagen, E. L., 4 Jan 2018, In : Nucleic Acids Research. 46, D1, p. D661-D667 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2017

Precision medicine in circadian rhythm sleep-wake disorders: current state and future perspectives

Keijzer, H., Snitselaar, M. A., Smits, M. G., Spruyt, K., Zee, P. C., Ehrhart, F. & Curfs, L. M. G., Mar 2017, In : Personalized Medicine. 14, 2, p. 171-182 12 p.

Research output: Contribution to journalReview articleAcademicpeer-review

2016

eNanoMapper Updates and its Collaborations with the Community #2

Willighagen, E., Tsiliki, G., Kohonen, P., Nymark, P., Chang, J., Owen, G., Rieswijk, L., Ehrhart, F., Helma, C., Rautenberg, M., Kilic, G., Jeliazkova, N., Doganis, P. & Sarimveis, H., 2016, In : NanoSafety Cluster Newsletter. Spring 2016, 7, p. 20-25

Research output: Contribution to journalArticleProfessional

New insights in Rett syndrome using pathway analysis for transcriptomics data

Ehrhart, F., Steinbusch - Coort, S., Cirillo, E., Smeets, E., Evelo, C. T. & Curfs, L., Sep 2016, In : Wiener Medizinische Wochenschrift. 166, 11, p. 346-352 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Rett syndrome - biological pathways leading from MECP2 to disorder phenotypes

Ehrhart, F., Steinbusch - Coort, S., Cirillo, E., Smeets, E., Evelo, C. T. & Curfs, L. M. G., 25 Nov 2016, In : Orphanet Journal of Rare Diseases. 11, 13 p., 158.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2015

Current systems biology approaches in hazard assessment of nanoparticles

Ehrhart, F., Evelo, C. T. A. & Willighagen, E., 1 Jan 2015, bioRxiv. (bioRxiv).

Research output: Book/ReportReportProfessional

eNanoMapper updates and its collaborations with the community

Willighagen, E., Ehrhart, F., Rieswijk, L., Jeliazkova, N., Evelo, C. T. A., Farcal, L., Hardy, B. & Sarimveis, H., 1 Jan 2015, In : NanoSafety Cluster Newsletter. 6, p. 14-17

Research output: Contribution to journalArticleProfessional