The artificial intelligence-based model ANORAK improves histopathological grading of lung adenocarcinoma

Xiaoxi Pan, Khalid Abduljabbar, Jose Coelho-Lima, Anca-Ioana Grapa, Hanyun Zhang, Alvin Ho Kwan Cheung, Juvenal Baena, Takahiro Karasaki, Claire Rachel Wilson, Marco Sereno, Selvaraju Veeriah, Sarah J. Aitken, Allan Hackshaw, Andrew G. Nicholson, Mariam Jamal-Hanjani, Charles Swanton, Mariam Jamal-Hanjani, Hanyun Zhang, Khalid AbdulJabbar, Xiaoxi PanYinyin Yuan*, Allan Hackshaw, John Le Quesne*, Selvaraju Veeriah, Takahiro Karasaki, Sam M. Janes, Anne-Marie Hacker, Abigail Sharp, Sean Smith, Harjot Kaur Dhanda, Kitty Chan, Camilla Pilotti, Rachel Leslie, Anca-Ioana Grapa, David Chuter, Mairead Mackenzie, Serena Chee, Aiman Alzetani, Eric Lim, Paulo De Sousa, Simon Jordan, Alexandra Rice, Hilgardt Raubenheimer, Harshil Bhayani, Lyn Ambrose, Anand Devaraj, Hema Chavan, Sofina Begum, Silviu I. Buderi, Daniel Kaniu, TRACERx Consortium, Hugo J.W.L. Aerts , David A. Moore*

*Corresponding author for this work

Research output: Contribution to journalArticleAcademicpeer-review

Abstract

The introduction of the International Association for the Study of Lung Cancer grading system has furthered interest in histopathological grading for risk stratification in lung adenocarcinoma. Complex morphology and high intratumoral heterogeneity present challenges to pathologists, prompting the development of artificial intelligence (AI) methods. Here we developed ANORAK (pyrAmid pooliNg crOss stReam Attention networK), encoding multiresolution inputs with an attention mechanism, to delineate growth patterns from hematoxylin and eosin-stained slides. In 1,372 lung adenocarcinomas across four independent cohorts, AI-based grading was prognostic of disease-free survival, and further assisted pathologists by consistently improving prognostication in stage I tumors. Tumors with discrepant patterns between AI and pathologists had notably higher intratumoral heterogeneity. Furthermore, ANORAK facilitates the morphological and spatial assessment of the acinar pattern, capturing acinus variations with pattern transition. Collectively, our AI method enabled the precision quantification and morphology investigation of growth patterns, reflecting intratumoral histological transitions in lung adenocarcinoma.Yuan and colleagues developed an artificial intelligence-based method to derive growth patterns and morphological features from hematoxylin and eosin-stained slides of lung adenocarcinoma samples, for improved tumor grading and patient prognostication.
Original languageEnglish
Pages (from-to)347–363
Number of pages29
JournalNature Cancer
Volume5
DOIs
Publication statusPublished - 1 Jan 2024

Keywords

  • INVASIVE PULMONARY ADENOCARCINOMA
  • INTERNATIONAL ASSOCIATION
  • CANCER
  • SYSTEM
  • EVOLUTION
  • IMPACT

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