Quantitative analysis of ChIP-seq data uncovers dynamic and sustained H3K4me3 and H3K27me3 modulation in cancer cells under hypoxia

Michiel E. Adriaens; Peggy Prickaerts; Michelle Chan-Seng-Yue; Twan van den Beucken; Vivian E. H. Dahlmans; Lars M. Eijssen; Timothy Beck; Bradly G. Wouters; Willem Voncken; Chris T. A. Evelo

doi:10.1186/s13072-016-0090-4

Quantitative analysis of ChIP-seq data uncovers dynamic and sustained H3K4me3 and H3K27me3 modulation in cancer cells under hypoxia

Michiel E. Adriaens^*, Peggy Prickaerts, Michelle Chan-Seng-Yue, Twan van den Beucken, Vivian E. H. Dahlmans, Lars M. Eijssen, Timothy Beck, Bradly G. Wouters, Willem Voncken, Chris T. A. Evelo

^*Corresponding author for this work

Research output: Contribution to journal › Article › Academic › peer-review

11 Citations (Web of Science)

Original language	English
Article number	48
Journal	Epigenetics & Chromatin
Volume	9
DOIs	https://doi.org/10.1186/s13072-016-0090-4
Publication status	Published - 1 Nov 2016

Keywords

Epigenomics
Transcriptomics
Data normalization
ChIP-sequencing
H3K4me3
H3K27me3
Hypoxia
MCF7

Access to Document

10.1186/s13072-016-0090-4

Cite this

Adriaens, M. E., Prickaerts, P., Chan-Seng-Yue, M., van den Beucken, T., Dahlmans, V. E. H., Eijssen, L. M., Beck, T., Wouters, B. G., Voncken, W., & Evelo, C. T. A. (2016). Quantitative analysis of ChIP-seq data uncovers dynamic and sustained H3K4me3 and H3K27me3 modulation in cancer cells under hypoxia. Epigenetics & Chromatin, 9, [48]. https://doi.org/10.1186/s13072-016-0090-4

Adriaens, Michiel E. ; Prickaerts, Peggy ; Chan-Seng-Yue, Michelle ; van den Beucken, Twan ; Dahlmans, Vivian E. H. ; Eijssen, Lars M. ; Beck, Timothy ; Wouters, Bradly G. ; Voncken, Willem ; Evelo, Chris T. A. / Quantitative analysis of ChIP-seq data uncovers dynamic and sustained H3K4me3 and H3K27me3 modulation in cancer cells under hypoxia. In: Epigenetics & Chromatin. 2016 ; Vol. 9.

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keywords = "Epigenomics, Transcriptomics, Data normalization, ChIP-sequencing, H3K4me3, H3K27me3, Hypoxia, MCF7",

author = "Adriaens, {Michiel E.} and Peggy Prickaerts and Michelle Chan-Seng-Yue and {van den Beucken}, Twan and Dahlmans, {Vivian E. H.} and Eijssen, {Lars M.} and Timothy Beck and Wouters, {Bradly G.} and Willem Voncken and Evelo, {Chris T. A.}",

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Quantitative analysis of ChIP-seq data uncovers dynamic and sustained H3K4me3 and H3K27me3 modulation in cancer cells under hypoxia. / Adriaens, Michiel E.; Prickaerts, Peggy; Chan-Seng-Yue, Michelle; van den Beucken, Twan; Dahlmans, Vivian E. H.; Eijssen, Lars M.; Beck, Timothy; Wouters, Bradly G.; Voncken, Willem ; Evelo, Chris T. A.

In: Epigenetics & Chromatin, Vol. 9, 48, 01.11.2016.

Research output: Contribution to journal › Article › Academic › peer-review

TY - JOUR

T1 - Quantitative analysis of ChIP-seq data uncovers dynamic and sustained H3K4me3 and H3K27me3 modulation in cancer cells under hypoxia

AU - Adriaens, Michiel E.

AU - Prickaerts, Peggy

AU - Chan-Seng-Yue, Michelle

AU - van den Beucken, Twan

AU - Dahlmans, Vivian E. H.

AU - Eijssen, Lars M.

AU - Beck, Timothy

AU - Wouters, Bradly G.

AU - Voncken, Willem

AU - Evelo, Chris T. A.

PY - 2016/11/1

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KW - Epigenomics

KW - Transcriptomics

KW - Data normalization

KW - ChIP-sequencing

KW - H3K4me3

KW - H3K27me3

KW - Hypoxia

KW - MCF7

U2 - 10.1186/s13072-016-0090-4

DO - 10.1186/s13072-016-0090-4

M3 - Article

C2 - 27822313

VL - 9

JO - Epigenetics & Chromatin

JF - Epigenetics & Chromatin

SN - 1756-8935

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ER -