Interpretability-Guided Data Augmentation for Robust Segmentation in Multi-centre Colonoscopy Data

Valentina Corbetta*, Regina Beets-Tan, Wilson Silva

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference article in proceedingAcademicpeer-review

Abstract

Multi-centre colonoscopy images from various medical centres exhibit distinct complicating factors and overlays that impact the image content, contingent on the specific acquisition centre. Existing Deep Segmentation networks struggle to achieve adequate generalizability in such data sets, and the currently available data augmentation methods do not effectively address these sources of data variability. As a solution, we introduce an innovative data augmentation approach centred on interpretability saliency maps, aimed at enhancing the generalizability of Deep Learning models within the realm of multi-centre colonoscopy image segmentation. The proposed augmentation technique demonstrates increased robustness across different segmentation models and domains. Thorough testing on a publicly available multi-centre dataset for polyp detection demonstrates the effectiveness and versatility of our approach, which is observed both in quantitative and qualitative results. The code is publicly available at: https://github.com/nki-radiology/interpretability_augmentation.
Original languageEnglish
Title of host publicationMachine Learning in Medical Imaging - 14th International Workshop, MLMI 2023, Held in Conjunction with MICCAI 2023, Proceedings
EditorsXiaohuan Cao, Xi Ouyang, Xuanang Xu, Islem Rekik, Zhiming Cui
PublisherSpringer Verlag
Pages330-340
Number of pages11
Volume14348 LNCS
ISBN (Print)9783031456725
DOIs
Publication statusPublished - 1 Jan 2024
Event14th International Workshop on Machine Learning in Medical Imaging, MLMI 2023 - Vancouver, Canada
Duration: 8 Oct 20238 Oct 2023
https://sites.google.com/view/mlmi2023

Publication series

SeriesLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume14348 LNCS
ISSN0302-9743

Workshop

Workshop14th International Workshop on Machine Learning in Medical Imaging, MLMI 2023
Abbreviated titleMLMI 2023
Country/TerritoryCanada
CityVancouver
Period8/10/238/10/23
Internet address

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