Fast and robust quantification of uncertainty in non-linear diffusion MRI models

R. L. Harms*, F. J. Fritz, S. Schoenmakers, A. Roebroeck*

*Corresponding author for this work

Research output: Contribution to journalArticleAcademicpeer-review

Abstract

Diffusion MRI (dMRI) allows for non-invasive investigation of brain tissue microstructure. By fitting a model to the dMRI signal, various quantitative measures can be derived from the data, such as fractional anisotropy, neurite density and axonal radii maps. We investigate the Fisher Information Matrix (FIM) and uncertainty propagation as a generally applicable method for quantifying the parameter uncertainties in linear and nonlinear diffusion MRI models. In direct comparison with Markov Chain Monte Carlo (MCMC) sampling, the FIM produces similar uncertainty estimates at much lower computational cost. Using acquired and simulated data, we then list several characteristics that influence the parameter variances, including data complexity and signal-to-noise ratio. For practical purposes we investigate a possible use of uncertainty estimates in decreasing intra-group variance in group statistics by uncertainty-weighted group estimates. This has potential use cases for detection and suppression of imaging artifacts.
Original languageEnglish
Article number120496
Number of pages16
JournalNeuroimage
Volume285
DOIs
Publication statusPublished - 1 Jan 2024

Keywords

  • Uncertainty estimates
  • Variances
  • Diffusion MRI
  • Microstructure
  • Fisher Information Matrix (FIM)
  • Cramer Rao Lower Bound (CRLB)
  • ORIENTATION DISPERSION
  • FIBER ORIENTATION
  • WILD BOOTSTRAP
  • OPTIMIZATION
  • FRAMEWORK
  • DENSITY
  • ACCELERATION
  • PARAMETERS
  • PRECISION
  • INFERENCE

Cite this