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  1. 2019
  2. Published
    SoM Study Grp, Kluytmans-van den Bergh, M. F. Q., Bruijning-Verhagen, P. C. J., Vandenbroucke-Grauls, C. M. J. E., de Brauwer, E. I. G. B., Buiting, A. G. M., ... Kluytmans, J. A. J. W. (2019). Contact precautions in single-bed or multiple-bed rooms for patients with extended-spectrum beta-lactamase-producing Enterobacteriaceae in Dutch hospitals: a cluster-randomised, crossover, non-inferiority study. Lancet Infectious Diseases, 19(10), 1069-1079. https://doi.org/10.1016/S1473-3099(19)30262-2
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  7. Published
    Calon, T. G. A., Trobos, M., Johansson, M. L., van Tongeren, J., van der Lugt-Degen, M., Janssen, A. M. L., ... Budding, A. E. (2019). Microbiome on the Bone-Anchored Hearing System: A Prospective Study. Frontiers in microbiology, 10, 1-11. [799]. https://doi.org/10.3389/fmicb.2019.00799
  8. Published
    DANCE Consortium, Cranendonk, D. R., Hugenholtz, F., Prins, J. M., Savelkoul, P. H. M., Budding, A. E., ... de Vries, P. J. (2019). The Skin Microbiota in Patients Hospitalized for Cellulitis and Association With Outcome. Clinical Infectious Diseases, 68(8), 1292-1299. https://doi.org/10.1093/cid/ciy709
  9. Published
    van der Sluis, W. B., Bouman, M-B., Mullender, M. G., Degen, M. C., Savelkoul, P. H. M., Meijerink, W. J. H. J., ... Budding, A. E. (2019). The effect of surgical fecal stream diversion of the healthy colon on the colonic microbiota. European Journal of Gastroenterology & Hepatology, 31(4), 451-457. https://doi.org/10.1097/MEG.0000000000001330
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  13. 2018
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    Huizinga, P., Schrauwen, E., Garcia-Cobos, S., Willemsen, I., Verhulst, C., Friedrich, A. W., ... Kluytmans, J. (2018). Extended-spectrum beta-lactamase producing Enterobacteriaceae (ESBL-E) isolated from bean sprouts in the Netherlands. PLOS ONE, 13(8), [e0203338]. https://doi.org/10.1371/journal.pone.0203338
  19. Published
    de Meij, T. G. J., de Groot, E. F. J., Peeters, C. F. W., de Boer, N. K. H., Kneepkens, C. M. F., Eck, A., ... Budding, A. E. (2018). Variability of core microbiota in newly diagnosed treatment-naive paediatric inflammatory bowel disease patients. PLOS ONE, 13(8), [0197649]. https://doi.org/10.1371/journal.pone.0197649
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  29. 2017
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  34. Published
    Eck, A., Zintgraf, L. M., de Groot, E. F. J., de Meij, T. G. J., Cohen, T. S., Savelkoul, P. H. M., ... Budding, A. E. (2017). Interpretation of microbiota-based diagnostics by explaining individual classifier decisions. BMC Bioinformatics, 18, [441]. https://doi.org/10.1186/s12859-017-1843-1
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    Eck, A., de Groot, E. F. J., de Meij, T. G. J., Welling, M., Savelkoul, P. H. M., & Budding, A. E. (2017). Robust Microbiota-Based Diagnostics for Inflammatory Bowel Disease. Journal of Clinical Microbiology, 55(6), 1720-1732. https://doi.org/10.1128/JCM.00162-17
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  41. 2016
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    de Meij, T. G. J., de Groot, E. F. J., Eck, A., Budding, A. E., Kneepkens, C. M. F., Benninga, M. A., ... Savelkoul, P. H. M. (2016). Characterization of Microbiota in Children with Chronic Functional Constipation. PLOS ONE, 11(10), [e0164731]. https://doi.org/10.1371/journal.pone.0164731
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  48. Published
    Janssens, P. L. H. R., Penders, J., Hursel, R., Budding, A. E., Savelkoul, P. H. M., & Westerterp-Plantenga, M. S. (2016). Long-Term Green Tea Supplementation Does Not Change the Human Gut Microbiota. PLOS ONE, 11(4), [e0153134]. https://doi.org/10.1371/journal.pone.0153134
  49. Published
    Reuland, E. A., al Naiemi, N., Kaiser, A. M., Heck, M., Kluytmans, J. A., Savelkoul, P. H., ... Vandenbroucke-Grauls, C. M. (2016). Prevalence and risk factors for carriage of ESBL-producing Enterobacteriaceae in Amsterdam. Journal of Antimicrobial Chemotherapy, 71(4), 1076-1082. https://doi.org/10.1093/jac/dkv441
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  51. Published
    de Meij, T. G., Budding, A. E., de Groot, E. F., Jansen, F. M., Kneepkens, C. M., Benninga, M. A., ... Savelkoul, P. H. (2016). Composition and stability of intestinal microbiota of healthy children within a Dutch population. Faseb Journal, 30(4), 1512-1522. https://doi.org/10.1096/fj.15-278622
  52. Published
    Kluytmans-van den Bergh, M. F., Huizinga, P., Bonten, M. J., Bos, M., De Bruyne, K., Friedrich, A. W., ... Kluytmans, J. A. (2016). Presence of mcr-1-positive Enterobacteriaceae in retail chicken meat but not in humans in the Netherlands since 2009. Eurosurveillance, 21(9), 12-18. https://doi.org/10.2807/1560-7917.ES.2016.21.9.30149
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  59. 2015
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    Huijsmans, C. J. J., van den Brule, A. J. C., Rigter, H., Poodt, J., van der Linden, J. C., Savelkoul, P. H. M., ... Hermans, M. H. A. (2015). Allelic imbalance at the HER2/TOP2A locus in breast cancer. Diagnostic Pathology, 10, [56]. https://doi.org/10.1186/s13000-015-0289-x
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    Rozemeijer, W., Fink, P., Rojas, E., Jones, C. H., Pavliakova, D., Giardina, P., ... Kluytmans, J. (2015). Evaluation of Approaches to Monitor Staphylococcus aureus Virulence Factor Expression during Human Disease. PLOS ONE, 10(2), [e0116945]. https://doi.org/10.1371/journal.pone.0116945
  71. Published
    Rutten, N. B. M. M., Gorissen, D. M. W., Eck, A., Niers, L. E. M., Vlieger, A. M., Besseling-van der Vaart, I., ... Rijkers, G. T. (2015). Long Term Development of Gut Microbiota Composition in Atopic Children: Impact of Probiotics. PLOS ONE, 10(9), [e0137681]. https://doi.org/10.1371/journal.pone.0137681
  72. Published
    Ascelijn Reuland, E., Halaby, T., Hays, J. P., de Jongh, D. M. C., Snetselaar, H. D. R., van Keulen, M., ... al Naiemi, N. (2015). Plasmid-Mediated AmpC: Prevalence in Community-Acquired Isolates in Amsterdam, the Netherlands, and Risk Factors for Carriage. PLOS ONE, 10(1), [e0113033]. https://doi.org/10.1371/journal.pone.0113033
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  75. 2014
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  78. Published
    Reuland, E. A., Hays, J. P., de Jongh, D. M. C., Abdelrehim, E., Willemsen, I., Kluytmans, J. A. J. W., ... al Naiemi, N. (2014). Detection and Occurrence of Plasmid-Mediated AmpC in Highly Resistant Gram-Negative Rods. PLOS ONE, 9(3), [e91396]. https://doi.org/10.1371/journal.pone.0091396
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    Overdevest, I. T. M. A., Heck, M., van der Zwaluw, K., Huijsdens, X., van Santen, M., Rijnsburger, M., ... Kluytmans, J. A. J. W. (2014). Extended-spectrum β-lactamase producing Klebsiella spp. in chicken meat and humans: a comparison of typing methods. Clinical Microbiology and Infection, 20(3), 251-255. https://doi.org/10.1111/1469-0691.12277
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    Daniels, L., Budding, A. E., de Korte, N., Eck, A., Bogaards, J. A., Stockmann, H. B., ... Boermeester, M. A. (2014). Fecal microbiome analysis as a diagnostic test for diverticulitis. European Journal of Clinical Microbiology & Infectious Diseases, 33(11), 1927-1936. https://doi.org/10.1007/s10096-014-2162-3
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    Reuland, E. A., al Naiemi, N., Raadsen, S. A., Savelkoul, P. H. M., Kluytmans, J. A. J. W., & Vandenbroucke-Grauls, C. M. J. E. (2014). Prevalence of ESBL-producing Enterobacteriaceae in raw vegetables. European Journal of Clinical Microbiology & Infectious Diseases, 33(10), 1843-1846. https://doi.org/10.1007/s10096-014-2142-7
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  86. 2013
  87. Published
    Savelkoul, P. H. M. (2013). Gezondheid. Maastricht: Maastricht University.
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    Kluytmans, J. A., Overdevest, I. T., Willemsen, I., Kluytmans-van den Bergh, M. F. Q., van der Zwaluw, K., Heck, M., ... Johnson, J. R. (2013). Extended-spectrum beta-lactamase-producing Escherichia coli from retail chicken meat and humans: comparison of strains, plasmids, resistance genes, and virulence factors. Clinical Infectious Diseases, 56(4), 478-487. https://doi.org/10.1093/cid/cis929
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  94. Published
    Loonen, A. J. M., Bos, M. P., van Meerbergen, B., Neerken, S., Catsburg, A., Dobbelaer, I., ... van den Brule, A. J. C. (2013). Comparison of Pathogen DNA Isolation Methods from Large Volumes of Whole Blood to Improve Molecular Diagnosis of Bloodstream Infections. PLOS ONE, 8(8), [e72349]. https://doi.org/10.1371/journal.pone.0072349
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  96. Published
    Reuland, E. A., Overdevest, I. T., al Naiemi, N., Kalpoe, J. S., Rijnsburger, M. C., Raadsen, S. A., ... Vandenbroucke-Grauls, C. M. J. E. (2013). High prevalence of ESBL-producing Enterobacteriaceae carriage in Dutch community patients with gastrointestinal complaints. Clinical Microbiology and Infection, 19(6), 542-549. https://doi.org/10.1111/j.1469-0691.2012.03947.x
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  98. 2012
  99. Published
    Hoefsloot, W., Boeree, M. J., van Nieuwkoop, C., Bernards, A. T., Savelkoul, P. H., van Ingen, J., & van Soolingen, D. (2012). No human transmission of Mycobacterium malmoense in a perfect storm setting. European Respiratory Journal, 40(6), 1576-1578. https://doi.org/10.1183/09031936.00096312
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  101. Published
    Verkade, E., Bergmans, A. M., Budding, A. E., van Belkum, A., Savelkoul, P., Buiting, A. G., & Kluytmans, J. (2012). Recent emergence of Staphylococcus aureus clonal complex 398 in human blood cultures. PLOS ONE, 7(10), [41855]. https://doi.org/10.1371/journal.pone.0041855
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  105. Published
  106. 2010
  107. Published