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Researcher

Savelkoul, P.H.M.

HH / A, Full professor - Key domain chair

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  1. 2016
  2. Published
    Aguirre Morales, M., Eck, A., Koenen, M. E., Savelkoul, P. H. M., Budding, A. E., & Venema, K. (2016). Diet drives quick changes in the metabolic activity and composition of human gut microbiota in a validated in vitro gut model. Research in Microbiology, 167(2), 114-125. https://doi.org/10.1016/j.resmic.2015.09.006
  3. Published
    The ATHENA national observational HIV cohort, Lowe, S., Oude Lashof, A., Posthouwer, D., Savelkoul, P., & van Loo, I. (2016). Factors associated with presenting late or with advanced HIV disease in the Netherlands, 1996-2014: results from a national observational cohort. BMJ Open, 6(1), [e009688]. https://doi.org/10.1136/bmjopen-2015-009688
  4. Published
    Scholte, J. B. J., Zhou, T. L., Bergmans, D. C. J. J., Rohde, G. G. U., Winkens, B., Van Dessel, H. A., ... van Mook, W. N. K. A. (2016). Stenotrophomonas maltophilia ventilator-associated pneumonia. A retrospective matched case-control study. Infectious Diseases, 48(10), 738-743. https://doi.org/10.1080/23744235.2016.1185534
  5. Published
    von Wintersdorff, C. J. H., Wolffs, P. F. G., Savelkoul, P. H. M., Nijsen, R. R. R., Lau, S., Gerhold, K., ... Penders, J. (2016). The gut resistome is highly dynamic during the first months of life. Future Microbiology, 11(4), 501-510. https://doi.org/10.2217/fmb.15.154
  6. 2015
  7. Published
    van Best, N., Hornef, M. W., Savelkoul, P. H. M., & Penders, J. (2015). On the origin of species: Factors shaping the establishment of infant's gut microbiota. Birth Defects Research Part C-Embryo Today-Reviews, 105(4), 240-251. https://doi.org/10.1002/bdrc.21113
  8. Published
    Mbakwa, C. A., Penders, J., Savelkoul, P. H., Thijs, C., Dagnelie, P. C., Mommers, M., & Arts, I. C. W. (2015). Gut colonization with methanobrevibacter smithii is associated with childhood weight development. Obesity, 23(12), 2508-2516. https://doi.org/10.1002/oby.21266
  9. Published
    Scholte, J. B. J., Duong, H. L., Linssen, C., van Dessel, H., Bergmans, D., van der Horst, R., ... van Mook, W. (2015). Empirical antibiotic therapy for pneumonia in intensive care units: a multicentre, retrospective analysis of potentially pathogenic microorganisms identified by endotracheal aspirates cultures. European Journal of Clinical Microbiology & Infectious Diseases, 34(11), 2295-2305. https://doi.org/10.1007/s10096-015-2482-y
  10. Published
    Aguirre, M., Eck, A., Koenen, M. E., Savelkoul, P. H. M., Budding, A. E., & Venema, K. (2015). Evaluation of an optimal preparation of human standardized fecal inocula for in vitro fermentation studies. Journal of Microbiological Methods, 117, 78-84. https://doi.org/10.1016/j.mimet.2015.07.019
  11. Published
    Benedikter, B. J., Volgers, C., Haenen, G. R. M. M., Savelkoul, P. H. M., Wouters, E. F. M., Rohde, G. G. U., ... Stassen, F. R. M. (2015). Cigarette smoke extract induces the release of extracellular vesicles by airway epithelial cells via cellular carbonyl stress. European Respiratory Journal, 46(suppl 59). https://doi.org/10.1183/13993003.congress-2015.PA5113
  12. Published
    Scholte, J. B. J., van der Velde, J. I. M., Linssen, C. F. M., van Dessel, H. A., Bergmans, D. C. J. J., Savelkoul, P. H. M., ... van Mook, W. N. K. A. (2015). Ventilator-associated Pneumonia caused by commensal oropharyngeal; a retrospective Analysis of a prospectively collected Database. BMC Pulmonary Medicine, 15, [86]. https://doi.org/10.1186/s12890-015-0087-y
  13. Published
    Huijsmans, C. J. J., van den Brule, A. J. C., Rigter, H., Poodt, J., van der Linden, J. C., Savelkoul, P. H. M., ... Hermans, M. H. A. (2015). Allelic imbalance at the HER2/TOP2A locus in breast cancer. Diagnostic Pathology, 10, [56]. https://doi.org/10.1186/s13000-015-0289-x
  14. Published
    Tedjo, D. I., Jonkers, D. M. A. E., Savelkoul, P. H., Masclee, A. A., van Best, N., Pierik, M. J., & Penders, J. (2015). The Effect of Sampling and Storage on the Fecal Microbiota Composition in Healthy and Diseased Subjects. PLOS ONE, 10(5), [e0126685]. https://doi.org/10.1371/journal.pone.0126685
  15. Published
    Mocroft, A., Lundgren, J. D., Ross, M., Law, M., Reiss, P., Kirk, O., ... Ryom, L. (2015). Development and Validation of a Risk Score for Chronic Kidney Disease in HIV Infection Using Prospective Cohort Data from the D:A:D Study. PLoS Medicine, 12(3), [e1001809]. https://doi.org/10.1371/journal.pmed.1001809
  16. Published
    van Hoof, M., Wigren, S., Duimel, H., Savelkoul, P. H. M., Flynn, M., & Stokroos, R. J. (2015). Can the hydroxyapatite-coated skin-penetrating abutment for bone conduction hearing implants integrate with the surrounding skin? Frontiers in Surgery, 2, [45]. https://doi.org/10.3389/fsurg.2015.00045
  17. Published
    Rozemeijer, W., Fink, P., Rojas, E., Jones, C. H., Pavliakova, D., Giardina, P., ... Kluytmans, J. (2015). Evaluation of Approaches to Monitor Staphylococcus aureus Virulence Factor Expression during Human Disease. PLOS ONE, 10(2), [e0116945]. https://doi.org/10.1371/journal.pone.0116945
  18. Published
    Rutten, N. B. M. M., Gorissen, D. M. W., Eck, A., Niers, L. E. M., Vlieger, A. M., Besseling-van der Vaart, I., ... Rijkers, G. T. (2015). Long Term Development of Gut Microbiota Composition in Atopic Children: Impact of Probiotics. PLOS ONE, 10(9), [e0137681]. https://doi.org/10.1371/journal.pone.0137681
  19. Published
    Ascelijn Reuland, E., Halaby, T., Hays, J. P., de Jongh, D. M. C., Snetselaar, H. D. R., van Keulen, M., ... al Naiemi, N. (2015). Plasmid-Mediated AmpC: Prevalence in Community-Acquired Isolates in Amsterdam, the Netherlands, and Risk Factors for Carriage. PLOS ONE, 10(1), [e0113033]. https://doi.org/10.1371/journal.pone.0113033
  20. Published
    Grasman, M. E., Pettersson, A. M., Catsburg, A., Koek, A. G., van Bodegraven, A. A., & Savelkoul, P. H. M. (2015). Tropheryma whipplei, a Potential Commensal Detected in Individuals Undergoing Routine Colonoscopy. Journal of Clinical Microbiology, 53(12), 3919-3921. https://doi.org/10.1128/JCM.02630-15
  21. Published
    ATHENA observational cohort (2015). Dispersion of the HIV-1 Epidemic in Men Who Have Sex with Men in the Netherlands: A Combined Mathematical Model and Phylogenetic Analysis. PLoS Medicine, 12(11), [e1001898]. https://doi.org/10.1371/journal.pmed.1001898
  22. 2014
  23. Published
    Scholte, J. B. J., van Dessel, H. A., Linssen, C. F. M., Bergmans, D. C. J. J., Savelkoul, P. H. M., Roekaerts, P. M. H. J., & van Mook, W. N. K. A. (2014). Endotracheal Aspirate and Bronchoalveolar Lavage Fluid Analysis: Interchangeable Diagnostic Modalities in Suspected Ventilator-Associated Pneumonia? Journal of Clinical Microbiology, 52(10), 3597-3604. https://doi.org/10.1128/JCM.01494-14
  24. Published
    von Wintersdorff, C. J. H., Penders, J., Stobberingh, E. E., Oude Lashof, A. M. L., Hoebe, C. J. P. A., Savelkoul, P. H. M., & Wolffs, P. F. G. (2014). High Rates of Antimicrobial Drug Resistance Gene Acquisition After International travel, the Netherlands. Emerging Infectious Diseases, 20(4), 649-657. https://doi.org/10.3201/eid2004.131718
  25. Published
    Reuland, E. A., Hays, J. P., de Jongh, D. M. C., Abdelrehim, E., Willemsen, I., Kluytmans, J. A. J. W., ... al Naiemi, N. (2014). Detection and Occurrence of Plasmid-Mediated AmpC in Highly Resistant Gram-Negative Rods. PLOS ONE, 9(3), [e91396]. https://doi.org/10.1371/journal.pone.0091396
  26. Published
    van den Brand, M., Peters, R. P. H., Catsburg, A., Rubenjan, A., Broeke, F. J., van den Dungen, F. A. M., ... Bos, M. P. (2014). Development of a multiplex real-time PCR assay for the rapid diagnosis of neonatal late onset sepsis. Journal of Microbiological Methods, 106, 8-15. https://doi.org/10.1016/j.mimet.2014.07.034
  27. Published
    Overdevest, I. T. M. A., Heck, M., van der Zwaluw, K., Huijsdens, X., van Santen, M., Rijnsburger, M., ... Kluytmans, J. A. J. W. (2014). Extended-spectrum β-lactamase producing Klebsiella spp. in chicken meat and humans: a comparison of typing methods. Clinical Microbiology and Infection, 20(3), 251-255. https://doi.org/10.1111/1469-0691.12277
  28. Published
    Wills, E. S., Jonkers, D. M. A. E., Savelkoul, P. H., Masclee, A. A., Pierik, M. J., & Penders, J. (2014). Fecal Microbial Composition of Ulcerative Colitis and Crohn's Disease Patients in Remission and Subsequent Exacerbation. PLOS ONE, 9(3), [e90981]. https://doi.org/10.1371/journal.pone.0090981
  29. Published
    Daniels, L., Budding, A. E., de Korte, N., Eck, A., Bogaards, J. A., Stockmann, H. B., ... Boermeester, M. A. (2014). Fecal microbiome analysis as a diagnostic test for diverticulitis. European Journal of Clinical Microbiology & Infectious Diseases, 33(11), 1927-1936. https://doi.org/10.1007/s10096-014-2162-3
  30. Published
    Reuland, E. A., al Naiemi, N., Raadsen, S. A., Savelkoul, P. H. M., Kluytmans, J. A. J. W., & Vandenbroucke-Grauls, C. M. J. E. (2014). Prevalence of ESBL-producing Enterobacteriaceae in raw vegetables. European Journal of Clinical Microbiology & Infectious Diseases, 33(10), 1843-1846. https://doi.org/10.1007/s10096-014-2142-7
  31. Published
    Scholte, J. B. J., van Mook, W. N. K. A., Linssen, C. F. M., van Dessel, H. A., Bergmans, D. C. J. J., Savelkoul, P. H. M., & Roekaerts, P. M. H. J. (2014). Surveillance cultures in intensive care units: A nationwide survey on current practice providing future perspectives. Journal of Critical Care, 29(5), 885.e7-885.e12. https://doi.org/10.1016/j.jcrc.2014.05.018
  32. Published
    Wolf, I., Bergervoet, P. W. M., Sebens, F. W., van den Oever, H. L. A., Savelkoul, P. H. M., & van der Zwet, W. C. (2014). The sink as a correctable source of extended-spectrum β-lactamase contamination for patients in the intensive care unit. Journal of Hospital Infection, 87(2), 126-130. https://doi.org/10.1016/j.jhin.2014.02.013
  33. 2013
  34. Published
    Savelkoul, P. H. M. (2013). Gezondheid. Maastricht: Maastricht University.
  35. Published
    Bosch, T., Verkade, E., van Luit, M., Pot, B., Vauterin, P., Burggrave, R., ... Schouls, L. (2013). High Resolution Typing by Whole Genome Mapping Enables Discrimination of LA-MRSA (CC398) Strains and Identification of Transmission Events. PLOS ONE, 8(6), [66493]. https://doi.org/10.1371/journal.pone.0066493
  36. Published
    de Meij, T. G., Budding, A. E., Grasman, M. E., Kneepkens, C. M., Savelkoul, P. H., & Mearin, M. L. (2013). Composition and diversity of the duodenal mucosa-associated microbiome in children with untreated coeliac disease. Scandinavian Journal of Gastroenterology, 48(5), 530-536. https://doi.org/10.3109/00365521.2013.775666
  37. Published
    Penders, J., Stobberingh, E. E., Savelkoul, P. H. M., & Wolffs, P. F. G. (2013). The human microbiome as a reservoir of antimicrobial resistance. Frontiers in microbiology, 4, 87. [87]. https://doi.org/10.3389/fmicb.2013.00087
  38. Published
    Boot, M., Raadsen, S., Savelkoul, P. H., & Vandenbroucke-Grauls, C. (2013). Rapid plasmid replicon typing by real time PCR melting curve analysis. BMC Microbiology, 13, [83]. https://doi.org/10.1186/1471-2180-13-83
  39. Published
    Kluytmans, J. A., Overdevest, I. T., Willemsen, I., Kluytmans-van den Bergh, M. F. Q., van der Zwaluw, K., Heck, M., ... Johnson, J. R. (2013). Extended-spectrum beta-lactamase-producing Escherichia coli from retail chicken meat and humans: comparison of strains, plasmids, resistance genes, and virulence factors. Clinical Infectious Diseases, 56(4), 478-487. https://doi.org/10.1093/cid/cis929
  40. Published
    Broersen, L. M., Kuipers, A. A. M., Balvers, M., van Wijk, N., Savelkoul, P. H. M., de Wilde, M. C., ... Kiliaan, A. J. (2013). A Specific Multi-Nutrient Diet Reduces Alzheimer-Like Pathology in Young Adult A beta PPswe/PS1(dE9) Mice. Journal of Alzheimer's Disease, 33(1), 177-190. https://doi.org/10.3233/JAD-2012-112039
  41. Published
    Loonen, A. J. M., Bos, M. P., van Meerbergen, B., Neerken, S., Catsburg, A., Dobbelaer, I., ... van den Brule, A. J. C. (2013). Comparison of Pathogen DNA Isolation Methods from Large Volumes of Whole Blood to Improve Molecular Diagnosis of Bloodstream Infections. PLOS ONE, 8(8), [e72349]. https://doi.org/10.1371/journal.pone.0072349
  42. Published
    Nijhuis, R., Samuelsen, O., Savelkoul, P., & van Zwet, A. (2013). Evaluation of a new real-time PCR assay (Check-Direct CPE) for rapid detection of KPC, OXA-48, VIM, and NDM carbapenemases using spiked rectal swabs. Diagnostic Microbiology and Infectious Disease, 77(4), 316-320. https://doi.org/10.1016/j.diagmicrobio.2013.09.007
  43. Published
    Reuland, E. A., Overdevest, I. T., al Naiemi, N., Kalpoe, J. S., Rijnsburger, M. C., Raadsen, S. A., ... Vandenbroucke-Grauls, C. M. J. E. (2013). High prevalence of ESBL-producing Enterobacteriaceae carriage in Dutch community patients with gastrointestinal complaints. Clinical Microbiology and Infection, 19(6), 542-549. https://doi.org/10.1111/j.1469-0691.2012.03947.x
  44. Published
    Geelen, T. H., Rossen, J. W., Beerens, A. M., Poort, L., Morre, S. A., Ritmeester, W. S., ... Savelkoul, P. H. (2013). Performance of cobas(R) 4800 and m2000 real-time assays for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in rectal and self-collected vaginal specimen. Diagnostic Microbiology and Infectious Disease, 77(2), 101-105. https://doi.org/10.1016/j.diagmicrobio.2013.06.020
  45. 2012
  46. Published
    Hoefsloot, W., Boeree, M. J., van Nieuwkoop, C., Bernards, A. T., Savelkoul, P. H., van Ingen, J., & van Soolingen, D. (2012). No human transmission of Mycobacterium malmoense in a perfect storm setting. European Respiratory Journal, 40(6), 1576-1578. https://doi.org/10.1183/09031936.00096312
  47. Published
    Nijhuis, R., van Zwet, A., Stuart, J. C., Weijers, T., & Savelkoul, P. (2012). Rapid molecular detection of extended-spectrum beta-lactamase gene variants with a novel ligation-mediated real-time PCR. Journal of Medical Microbiology, 61(11), 1563-1567. https://doi.org/10.1099/jmm.0.047910-0
  48. Published
    Verkade, E., Bergmans, A. M., Budding, A. E., van Belkum, A., Savelkoul, P., Buiting, A. G., & Kluytmans, J. (2012). Recent emergence of Staphylococcus aureus clonal complex 398 in human blood cultures. PLOS ONE, 7(10), [41855]. https://doi.org/10.1371/journal.pone.0041855
  49. Published
    Huijsmans, C. J. J., Poodt, J., Damen, J., van der Linden, J. C., Savelkoul, P. H., Pruijt, J. F., ... Hermans, M. H. A. (2012). Single nucleotide polymorphism (SNP)-based loss of heterozygosity (LOH) testing by real time PCR in patients suspect of myeloproliferative disease. PLOS ONE, 7(7), [38362]. https://doi.org/10.1371/journal.pone.0038362
  50. Published
    Mac Aogain, M., Kulah, C., Rijnsburger, M., Celebi, G., Savelkoul, P. H., O'Gara, F., & Mooij, M. J. (2012). Characterization of imipenem resistance mechanisms in Pseudomonas aeruginosa isolates from Turkey. Clinical Microbiology and Infection, 18(7), E262-E265. https://doi.org/10.1111/j.1469-0691.2012.03899.x
  51. Published
    Halaby, T., Reuland, A. E., al Naiemi, N., Potron, A., Savelkoul, P. H., Vandenbroucke-Grauls, C. M. J. E., & Nordmann, P. (2012). A Case of New Delhi Metallo-β-Lactamase 1 (NDM-1)-Producing Klebsiella pneumoniae with Putative Secondary Transmission from the Balkan region in the Netherlands. Antimicrobial Agents and Chemotherapy, 56(5), 2790-2791. https://doi.org/10.1128/AAC.00111-12
  52. Published
    Bode, L. G., van Wunnik, P., Vaessen, N., Savelkoul, P. H., & Smeets, L. C. (2012). Rapid detection of methicillin-resistant Staphylococcus aureus in screening samples by relative quantification between the mecA gene and the SA442 gene. Journal of Microbiological Methods, 89(2), 129-132. https://doi.org/10.1016/j.mimet.2012.02.014
  53. 2010
  54. Published
    van Dommelen, L., van Tiel, F. H., Ouburg, S., Brouwers, E. E. H. G., Terporten, P. H. W., Savelkoul, P. H. M., ... Hoebe, C. J. P. A. (2010). Alarmingly poor performance in Chlamydia trachomatis point-of-care testing. Sexually Transmitted Infections, 86(5), 355-359. https://doi.org/10.1136/sti.2010.042598
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