Toward interoperable bioscience data

S.A. Sansone; P. Rocca Serra; D. Field; E. Maguire; C. Taylor; O. Hofmann; H. Fang; S. Neumann; W. Tong; L. Amaral Zettler; K. Begley; T. Booth; L. Bougueleret; G. Burns; B. Chapman; T. Clark; L.A. Coleman; J. Copeland; S. Das; A. de Daruvar; P. de Matos; I. Dix; S. Edmunds; C.T.A. Evelo; M.J. Forster; P. Gaudet; J. Gilbert; C. Goble; J.L. Griffin; D. Jacob; J. Kleinjans; L. Harland; K. Haug; H. Hermjakob; S.J. Ho Sui; A. Laederach; S. Liang; S. Marshall; A. McGrath; E. Merrill; D. Reilly; M. Roux; C.E. Shamu; C.A. Shang; C. Steinbeck; A. Trefethen; B. Jones; K. Wolstencroft; I. Xenarios; W. Hide

doi:10.1038/ng.1054

Toward interoperable bioscience data

S.A. Sansone^*, P. Rocca Serra, D. Field, E. Maguire, C. Taylor, O. Hofmann, H. Fang, S. Neumann, W. Tong, L. Amaral Zettler, K. Begley, T. Booth, L. Bougueleret, G. Burns, B. Chapman, T. Clark, L.A. Coleman, J. Copeland, S. Das, A. de DaruvarP. de Matos, I. Dix, S. Edmunds, C.T.A. Evelo, M.J. Forster, P. Gaudet, J. Gilbert, C. Goble, J.L. Griffin, D. Jacob, J. Kleinjans, L. Harland, K. Haug, H. Hermjakob, S.J. Ho Sui, A. Laederach, S. Liang, S. Marshall, A. McGrath, E. Merrill, D. Reilly, M. Roux, C.E. Shamu, C.A. Shang, C. Steinbeck, A. Trefethen, B. Jones, K. Wolstencroft, I. Xenarios, W. Hide

^*Corresponding author for this work

Research output: Contribution to journal › Article › Academic › peer-review

Abstract

To make full use of research data, the bioscience community needs to adopt technologies and reward mechanisms that support interoperability and promote the growth of an open 'data commoning' culture. Here we describe the prerequisites for data commoning and present an established and growing ecosystem of solutions using the shared 'Investigation-Study-Assay' framework to support that vision.

Original language	English
Pages (from-to)	121-126
Number of pages	6
Journal	Nature Genetics
Volume	44
Issue number	2
DOIs	https://doi.org/10.1038/ng.1054
Publication status	Published - Feb 2012

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Sansone, S. A., Rocca Serra, P., Field, D., Maguire, E., Taylor, C., Hofmann, O., Fang, H., Neumann, S., Tong, W., Amaral Zettler, L., Begley, K., Booth, T., Bougueleret, L., Burns, G., Chapman, B., Clark, T., Coleman, L. A., Copeland, J., Das, S., ... Hide, W. (2012). Toward interoperable bioscience data. Nature Genetics, 44(2), 121-126. https://doi.org/10.1038/ng.1054

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abstract = "To make full use of research data, the bioscience community needs to adopt technologies and reward mechanisms that support interoperability and promote the growth of an open 'data commoning' culture. Here we describe the prerequisites for data commoning and present an established and growing ecosystem of solutions using the shared 'Investigation-Study-Assay' framework to support that vision.",

author = "S.A. Sansone and {Rocca Serra}, P. and D. Field and E. Maguire and C. Taylor and O. Hofmann and H. Fang and S. Neumann and W. Tong and {Amaral Zettler}, L. and K. Begley and T. Booth and L. Bougueleret and G. Burns and B. Chapman and T. Clark and L.A. Coleman and J. Copeland and S. Das and {de Daruvar}, A. and {de Matos}, P. and I. Dix and S. Edmunds and C.T.A. Evelo and M.J. Forster and P. Gaudet and J. Gilbert and C. Goble and J.L. Griffin and D. Jacob and J. Kleinjans and L. Harland and K. Haug and H. Hermjakob and {Ho Sui}, S.J. and A. Laederach and S. Liang and S. Marshall and A. McGrath and E. Merrill and D. Reilly and M. Roux and C.E. Shamu and C.A. Shang and C. Steinbeck and A. Trefethen and B. Jones and K. Wolstencroft and I. Xenarios and W. Hide",

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doi = "10.1038/ng.1054",

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Sansone, SA, Rocca Serra, P, Field, D, Maguire, E, Taylor, C, Hofmann, O, Fang, H, Neumann, S, Tong, W, Amaral Zettler, L, Begley, K, Booth, T, Bougueleret, L, Burns, G, Chapman, B, Clark, T, Coleman, LA, Copeland, J, Das, S, de Daruvar, A, de Matos, P, Dix, I, Edmunds, S, Evelo, CTA, Forster, MJ, Gaudet, P, Gilbert, J, Goble, C, Griffin, JL, Jacob, D, Kleinjans, J, Harland, L, Haug, K, Hermjakob, H, Ho Sui, SJ, Laederach, A, Liang, S, Marshall, S, McGrath, A, Merrill, E, Reilly, D, Roux, M, Shamu, CE, Shang, CA, Steinbeck, C, Trefethen, A, Jones, B, Wolstencroft, K, Xenarios, I & Hide, W 2012, 'Toward interoperable bioscience data', Nature Genetics, vol. 44, no. 2, pp. 121-126. https://doi.org/10.1038/ng.1054

TY - JOUR

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AU - Sansone, S.A.

AU - Rocca Serra, P.

AU - Field, D.

AU - Maguire, E.

AU - Taylor, C.

AU - Hofmann, O.

AU - Fang, H.

AU - Neumann, S.

AU - Tong, W.

AU - Amaral Zettler, L.

AU - Begley, K.

AU - Booth, T.

AU - Bougueleret, L.

AU - Burns, G.

AU - Chapman, B.

AU - Clark, T.

AU - Coleman, L.A.

AU - Copeland, J.

AU - Das, S.

AU - de Daruvar, A.

AU - de Matos, P.

AU - Dix, I.

AU - Edmunds, S.

AU - Evelo, C.T.A.

AU - Forster, M.J.

AU - Gaudet, P.

AU - Gilbert, J.

AU - Goble, C.

AU - Griffin, J.L.

AU - Jacob, D.

AU - Kleinjans, J.

AU - Harland, L.

AU - Haug, K.

AU - Hermjakob, H.

AU - Ho Sui, S.J.

AU - Laederach, A.

AU - Liang, S.

AU - Marshall, S.

AU - McGrath, A.

AU - Merrill, E.

AU - Reilly, D.

AU - Roux, M.

AU - Shamu, C.E.

AU - Shang, C.A.

AU - Steinbeck, C.

AU - Trefethen, A.

AU - Jones, B.

AU - Wolstencroft, K.

AU - Xenarios, I.

AU - Hide, W.

PY - 2012/2

Y1 - 2012/2

N2 - To make full use of research data, the bioscience community needs to adopt technologies and reward mechanisms that support interoperability and promote the growth of an open 'data commoning' culture. Here we describe the prerequisites for data commoning and present an established and growing ecosystem of solutions using the shared 'Investigation-Study-Assay' framework to support that vision.

AB - To make full use of research data, the bioscience community needs to adopt technologies and reward mechanisms that support interoperability and promote the growth of an open 'data commoning' culture. Here we describe the prerequisites for data commoning and present an established and growing ecosystem of solutions using the shared 'Investigation-Study-Assay' framework to support that vision.

U2 - 10.1038/ng.1054

DO - 10.1038/ng.1054

M3 - Article

SN - 1061-4036

VL - 44

SP - 121

EP - 126

JO - Nature Genetics

JF - Nature Genetics

IS - 2

ER -

Toward interoperable bioscience data

Abstract

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