SynthBrainGrow: Synthetic Diffusion Brain Aging for Longitudinal MRI Data Generation in Young People

Anna Zapaishchykova*, Benjamin H. Kann*, Divyanshu Tak, Zezhong Ye, Daphne A. Haas-Kogan, Hugo J.W.L. Aerts

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference article in proceedingAcademicpeer-review

Abstract

Synthetic longitudinal brain MRI simulates brain aging and would enable more efficient research on neurodevelopmental and neurodegenerative conditions. Synthetically generated, age-adjusted brain images could serve as valuable alternatives to costly longitudinal imaging acquisitions, serve as internal controls for studies looking at the effects of environmental or therapeutic modifiers on brain development, and allow data augmentation for diverse populations. In this paper, we present a diffusion-based approach called SynthBrainGrow for synthetic brain aging with a two-year step. To validate the feasibility of using synthetically generated data on downstream tasks, we compared structural volumetrics of two-year-aged brains against synthetically aged brain MRI. The use of structural similarity indices, such as the Structural Similarity Index Measure (SSIM), for evaluating synthetic medical images has come under recent scrutiny. These indices may not effectively capture the perceptual quality or clinical usefulness in synthesized radiology scans. To assess the performance of SynthBrainGrow, we evaluated the substructural volumetric similarity between synthetic and real patient scans. Results show that SynthBrainGrow can accurately capture substructure volumetrics and simulate structural changes such as ventricle enlargement and cortical thinning. Generating longitudinal brain datasets from cross-sectional data could enable augmented training and benchmarking of computational tools for analyzing lifespan trajectories. This work signifies an important advance in generative modeling to synthesize realistic longitudinal data with limited lifelong MRI scans. The code is available at https://github.com/zapaishchykova/SynthBrainGrow.
Original languageEnglish
Title of host publicationDeep Generative Models - 4th MICCAI Workshop, DGM4MICCAI 2024, Held in Conjunction with MICCAI 2024, Proceedings
EditorsAnirban Mukhopadhyay, Ilkay Oksuz, Sandy Engelhardt, Dorit Mehrof, Yixuan Yuan
PublisherSpringer Verlag
Pages75-86
Number of pages12
Volume15224 LNCS
ISBN (Electronic)978-3-031-72744-3
ISBN (Print)9783031727436
DOIs
Publication statusPublished - 2025
EventDeep Generative Models workshop @ MICCAI 2024 - Palmeraie Conference Centre, Marrakesh, Morocco
Duration: 10 Oct 202410 Oct 2024
https://dgm4miccai.github.io/

Publication series

SeriesLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume15224 LNCS
ISSN0302-9743

Workshop

WorkshopDeep Generative Models workshop @ MICCAI 2024
Abbreviated titleDGM4MICCAI 2024
Country/TerritoryMorocco
CityMarrakesh
Period10/10/2410/10/24
Other4th Workshop on Deep Generative Models for Medical Image Computing and Computer Assisted Intervention, DGM4MICCAI 2024, held in Conjunction with 27th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2024
Internet address

Keywords

  • Diffusion Probabilistic Models
  • Generative Models
  • Neural aging

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