Expected Value of Sample Information Calculations for Risk Prediction Model Validation

Mohsen Sadatsafavi*, Andrew J. Vickers, Tae Yoon Lee, Paul Gustafson, Laure Wynants

*Corresponding author for this work

Research output: Contribution to journalArticleAcademicpeer-review

Abstract

Background The purpose of external validation of a risk prediction model is to evaluate its performance before recommending it for use in a new population. Sample size calculations for such validation studies are currently based on classical inferential statistics around metrics of discrimination, calibration, and net benefit (NB). For NB as a measure of clinical utility, the relevance of inferential statistics is doubtful. Value-of-information methodology enables quantifying the value of collecting validation data in terms of expected gain in clinical utility. Methods We define the validation expected value of sample information (EVSI) as the expected gain in NB by procuring a validation sample of a given size. We propose 3 algorithms for EVSI computation and compare their face validity and computation time in simulation studies. In a case study, we use the non-US subset of a clinical trial to create a risk prediction model for short-term mortality after myocardial infarction and calculate validation EVSI at a range of sample sizes for the US population. Results Computation methods generated similar EVSI values in simulation studies, although they differed in numerical accuracy and computation times. At 2% risk threshold, procuring 1,000 observations for external validation, had an EVSI of 0.00101 in true-positive units or 0.04938 in false-positive units. Scaled by heart attack incidence in the United States, the population EVSI was 806 in true positives gained, or 39,500 in false positives averted, annually. Validation studies with >4,000 observations had diminishing returns, as the EVSIs were approaching their maximum possible value. Conclusion Value-of-information methodology quantifies the return on investment from conducting an external validation study and can provide a value-based perspective when designing such studies.
Original languageEnglish
Number of pages13
JournalMedical Decision Making
DOIs
Publication statusE-pub ahead of print - Feb 2025

Keywords

  • risk prediction
  • value of information
  • uncertainty
  • Bayesian statistics
  • SENSITIVITY

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