Comparison of statistical methods and the use of quality control samples for batch effect correction in human transcriptome data

Almudena Espin-Perez; Chris Portier; Marc Chadeau-Hyam; Karin van Veldhoven; Jos C. S. Kleinjans; Theo M. C. M. de Kok

doi:10.1371/journal.pone.0202947

Comparison of statistical methods and the use of quality control samples for batch effect correction in human transcriptome data

Almudena Espin-Perez^*, Chris Portier, Marc Chadeau-Hyam, Karin van Veldhoven, Jos C. S. Kleinjans, Theo M. C. M. de Kok

^*Corresponding author for this work

Research output: Contribution to journal › Article › Academic › peer-review

13 Citations (Web of Science)

Original language	English
Article number	0202947
Number of pages	19
Journal	PLOS ONE
Volume	13
Issue number	8
DOIs	https://doi.org/10.1371/journal.pone.0202947
Publication status	Published - 30 Aug 2018

Keywords

GENE-EXPRESSION
MICROARRAY
DIAGNOSIS

Access to Document

10.1371/journal.pone.0202947

https://doi.org/10.1371/journal.pone.0202947

Cite this

@article{332e9320d0bf4155b3535522673ac780,

title = "Comparison of statistical methods and the use of quality control samples for batch effect correction in human transcriptome data",

keywords = "GENE-EXPRESSION, MICROARRAY, DIAGNOSIS",

author = "Almudena Espin-Perez and Chris Portier and Marc Chadeau-Hyam and {van Veldhoven}, Karin and Kleinjans, {Jos C. S.} and {de Kok}, {Theo M. C. M.}",

year = "2018",

month = aug,

day = "30",

doi = "10.1371/journal.pone.0202947",

language = "English",

volume = "13",

journal = "PLOS ONE",

issn = "1932-6203",

publisher = "Public Library of Science",

number = "8",

}

Comparison of statistical methods and the use of quality control samples for batch effect correction in human transcriptome data. / Espin-Perez, Almudena; Portier, Chris; Chadeau-Hyam, Marc; van Veldhoven, Karin; Kleinjans, Jos C. S.; de Kok, Theo M. C. M.

In: PLOS ONE, Vol. 13, No. 8, 0202947, 30.08.2018.

Research output: Contribution to journal › Article › Academic › peer-review

TY - JOUR

T1 - Comparison of statistical methods and the use of quality control samples for batch effect correction in human transcriptome data

AU - Espin-Perez, Almudena

AU - Portier, Chris

AU - Chadeau-Hyam, Marc

AU - van Veldhoven, Karin

AU - Kleinjans, Jos C. S.

AU - de Kok, Theo M. C. M.

PY - 2018/8/30

Y1 - 2018/8/30

KW - GENE-EXPRESSION

KW - MICROARRAY

KW - DIAGNOSIS

U2 - 10.1371/journal.pone.0202947

DO - 10.1371/journal.pone.0202947

M3 - Article

C2 - 30161168

VL - 13

JO - PLOS ONE

JF - PLOS ONE

SN - 1932-6203

IS - 8

M1 - 0202947

ER -