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A comparative study of Monte Carlo methods for efficient evaluation of marginal likelihood

  • David Ardia
  • , Nalan Bastürk*
  • , Lennart F. Hoogerheide
  • , Herman K. van Dijk
  • *Corresponding author for this work

Research output: Contribution to journalArticleAcademicpeer-review

Abstract

Strategic choices for efficient and accurate evaluation of marginal likelihoods by means of Monte Carlo simulation methods are studied for the case of highly non-elliptical posterior distributions. A comparative analysis is presented of possible advantages and limitations of different simulation techniques; of possible choices of candidate distributions and choices of target or warped target distributions; and finally of numerical standard errors. The importance of a robust and flexible estimation strategy is demonstrated where the complete posterior distribution is explored. Given an appropriately yet quickly tuned adaptive candidate, straightforward importance sampling provides a computationally efficient estimator of the marginal likelihood (and a reliable and easily computed corresponding numerical standard error) in the cases investigated, which include a non-linear regression model and a mixture GARCH model. Warping the posterior density can lead to a further gain in efficiency, but it is more important that the posterior kernel be appropriately wrapped by the candidate distribution than that it is warped.

Original languageEnglish
Pages (from-to)3398-3414
Number of pages17
JournalComputational Statistics & Data Analysis
Volume56
Issue number11
DOIs
Publication statusPublished - Nov 2012
Externally publishedYes

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