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Research Output 2014 2019

2019
Open Access
2018

Biological pathways leading from ANGPTL8 to Diabetes Mellitus: a co-expression network based analysis

Siddiqa, A., Cirillo, E., Tareen, S. H. K., Ali, A., Kutmon, M., Eijssen, L. M. T., Ahmad, J., Evelo, C. T. & Coort, S. L., 21 Dec 2018, In : Frontiers in physiology. 9, 15 p., 1841.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Exploring the cellular network of metabolic flexibility in the adipose tissue

Tareen, S. H. K., Kutmon, M., Adriaens, M., Mariman, E., de Kok, T., Arts, I. & Evelo, C., 5 Jul 2018, In : Genes and nutrition. 13, 8 p., 17.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Profiling cellular processes in adipose tissue during weight loss using time series gene expression

Tareen, S. H. K., Adriaens, M. E., Arts, I. C. W., de Kok, T. M., Vink, R. G., Roumans, N. J. T., van Baak, M. A., Mariman, E. C. M., Evelo, C. T. & Kutmon, M., Nov 2018, In : Genes. 9, 11, 16 p., 525.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2017

Adipose tissue gene expression is differentially regulated with different rates of weight loss in overweight and obese humans

Vink, R. G., Roumans, N. J., Fazelzadeh, P., Tareen, S. H. K., Boekschoten, M. V., van Baak, M. A. & Mariman, E. C., Feb 2017, In : International Journal of Obesity. 41, 2, p. 309–316 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Visualizing the regulatory role of Angiopoietin-like protein 8 (ANGPTL8) in glucose and lipid metabolic pathways

Siddiqa, A., Cirillo, E., Tareen, S. H. K., Ali, A., Kutmon, M., Eijssen, L., Ahmad, J., Evelo, C. T. & Coort, S. L., Oct 2017, In : Genomics. 109, 5-6, p. 408-418 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

2016

Formal modeling and analysis of ER-α associated Biological Regulatory Network in breast cancer

Khalid, S., Hanif, R., Tareen, S. H. K., Siddiqa, A., Bibi, Z. & Ahmad, J., 20 Oct 2016, In : PEERJ. 4, p. e2542 33 p., 2542.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Logical Analysis of Regulation of Interleukin-12 Expression Pathway During HCV Infection

Farooqi, Z-R., Tareen, S. H. K., Ahmed, J. & Zaidi, N-S. S., 2016, In : Protein and Peptide Letters. 23, 6, p. 581-589

Research output: Contribution to journalArticleAcademicpeer-review

On the modeling and analysis of the biological regulatory network of NF-kB activation in HIV-1 infection

Bibi, Z., Ahmad, J., Ali, A., Siddiqa, A., Shahzad, S., Tareen, S. H. K., Janjua, H. A. & Khusro, S., 8 Jan 2016, In : Complex Adaptive Systems Modeling . 4

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2015

Modeling and analysis of innate immune responses induced by the host cells against hepatitis C virus infection.

Obaid, A., Ahmad, J., Naz, A., Awan, F. M., Paracha, R. Z., Tareen, S. H. K., Anjum, S., Raza, A., Baumbach, J. & Ali, A., May 2015, In : Integrative biology : quantitative biosciences from nano to macro. 7, 5, p. 544-59 16 p.

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)

Modelling and Analysis of the Feeding Regimen Induced Entrainment of Hepatocyte Circadian Oscillators Using Petri Nets

Tareen, S. H. K. & Ahmad, J., 1 Mar 2015, In : PLOS ONE. 10, 3

Research output: Contribution to journalArticleAcademicpeer-review

Parametric linear hybrid automata for complex environmental systems modeling

Tareen, S. H. K., Ahmad, J. & Roux, O., 9 Jul 2015, In : Frontiers in Environmental Science. 3, 47, 14 p., 47.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

Structural modeling and analysis of dengue-mediated inhibition of interferon signaling pathway.

Aslam, B., Ahmad, J., Ali, A., Paracha, R. Z., Tareen, S. H. K., Khusro, S., Ahmad, T., Muhammad, S. A. & Niazi6 And V Azevedo, U., 2015, In : Genetics and molecular research : GMR. 14, 2, p. 4215-4237 23 p.

Research output: Contribution to journalArticleAcademicpeer-review

2014
6 Citations (Scopus)

Formal modelling of toll like receptor 4 and JAK/STAT signalling pathways: Insight into the roles of SOCS-1, interferon-b and proinflammatory cytokines in Sepsis

Paracha, R. Z., Ahmad, J., Ali, A., Hussain, R., Niazi, U., Tareen, S. H. K. & Aslam, B., 25 Sep 2014, In : PLOS ONE. 9, 9

Research output: Contribution to journalArticleAcademicpeer-review

7 Citations (Scopus)

On the modelling and analysis of the regulatory network of dengue virus pathogenesis and clearance

Aslam, B., Ahmad, J., Ali, A., Paracha, R. Z., Tareen, S. H. K., Niazi, U. & Saeed, T., 2014, Computational Biology and Chemistry. Elsevier Ltd, p. 277-291 15 p. (Computational Biology and Chemistry, Vol. 53).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademic