20132019

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2019

Altered DNA methylation in children born to mothers with rheumatoid arthritis during pregnancy

Ince-Askan, H., Mandaviya, P. R., Felix, J. F., Duijts, L., van Meurs, J. B., Hazes, J. M. W. & Dolhain, R. J. E. M., Sep 2019, In : Annals of the Rheumatic Diseases. 78, 9, p. 1198-1204 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Association of dietary folate and vitamin B-12 intake with genome-wide DNA methylation in blood: a large-scale epigenome-wide association analysis in 5841 individuals

Mandaviya, P. R., Joehanes, R., Brody, J., Castillo-Fernandez, J. E., Dekkers, K. F., Do, A. N., Graff, M., Hänninen, I. K., Tanaka, T., de Jonge, E. A. L., Kiefte-de Jong, J. C., Absher, D. M., Aslibekyan, S., de Rijke, Y. B., Fornage, M., Hernandez, D. G., Hurme, M. A., Ikram, M. A., Jacques, P. F., Justice, A. E. & 28 others, Kiel, D. P., Lemaitre, R. N., Mendelson, M. M., Mikkilä, V., Moore, A. Z., Pallister, T., Raitakari, O. T., Schalkwijk, C. G., Sha, J., Slagboom, E. P. E., Smith, C. E., Stehouwer, C. D. A., Tsai, P-C., Uitterlinden, A. G., van der Kallen, C. J. H., van Heemst, D., Arnett, D. K., Bandinelli, S., Bell, J. T., Heijmans, B. T., Lehtimäki, T., Levy, D., North, K. E., Sotoodehnia, N., van Greevenbroek, M. M. J., van Meurs, J. B. J., Heil, S. G. & BIOS Consortium, CHARGE Consortium Epigenetics Working Group, CHARGE Consortium Nutrition Working Group, Aug 2019, In : American Journal of Clinical Nutrition. 110, 2, p. 437-450 14 p., 15.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Evaluation of commonly used analysis strategies for epigenome- and transcriptome-wide association studies through replication of large-scale population studies

BIOS Consortium, 14 Nov 2019, In : Genome Biology. 20, 1, 14 p., 235.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Interaction between plasma homocysteine and the MTHFR c.677C > T polymorphism is associated with site-specific changes in DNA methylation in humans

Nash, A. J., Mandaviya, P. R., Dib, M-J., Uitterlinden, A. G., van Meurs, J., Heil, S. G., Andrew, T. & Ahmadi, K. R., Jan 2019, In : Faseb Journal. 33, 1, p. 833-843 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Newborn DNA-methylation, childhood lung function, and the risks of asthma and COPD across the life course

den Dekker, H. T., Burrows, K., Felix, J. F., Salas, L. A., Nedeljkovic, I., Yao, J., Rifas-Shiman, S. L., Ruiz-Arenas, C., Amin, N., Bustamante, M., DeMeo, D. L., Henderson, A. J., Howe, C. G., Hivert, M-F., Ikram, M. A., de Jongste, J. C., Lahousse, L., Mandaviya, P. R., van Meurs, J. B., Pinart, M. & 12 others, Sharp, G. C., Stolk, L., Uitterlinden, A. G., Anto, J. M., Litonjua, A. A., Breton, C. V., Brusselle, G. G., Sunyer, J., Smith, G. D., Relton, C. L., Jaddoe, V. W. V. & Duijts, L., 4 Apr 2019, In : European Respiratory Journal. 53, 4, 12 p., 1801795.

Research output: Contribution to journalArticleAcademicpeer-review

Whole Blood Gene Expression Associated With Clinical Biological Age

Lin, H., Lunetta, K. L., Zhao, Q., Mandaviya, P. R., Rong, J., Benjamin, E. J., Joehanes, R., Levy, D., van Meurs, J. B. J., Larson, M. G. & Murabito, J. M., Jan 2019, In : Journals of Gerontology Series A-Biological Sciences and Medical Sciences. 74, 1, p. 81-88 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2018

Association of maternal prenatal smoking GFI1-locus and cardiometabolic phenotypes in 18,212 adults

Parmar, P., Lowry, E., Cugliari, G., Suderman, M., Wilson, R., Karhunen, V., Andrew, T., Wiklund, P., Wielscher, M., Guarrera, S., Teumer, A., Lehne, B., Milani, L., de Klein, N., Mishra, P. P., Melton, P. E., Mandaviya, P. R., Kasela, S., Nano, J., Zhang, W. & 32 others, Zhang, Y., Uitterlinden, A. G., Peters, A., Schoettker, B., Gieger, C., Anderson, D., Boomsma, D., Grabe, H. J., Panico, S., Veldink, J. H., van Meurs, J. B. J., van den Berg, L., Beilin, L. J., Franke, L., Loh, M., van Greevenbroek, M. M. J., Nauck, M., Kahonen, M., Hurme, M. A., Raitakari, O. T., Franco, O. H., Slagboom, P. E., van der Harst, P., Kunze, S., Felix, S. B., Zhang, T., Chen, W., Mori, T. A., Bonnefond, A., Heijmans, B. T., BIOS Consortium & GLOBAL Meth QTL, Dec 2018, In : EBioMedicine. 38, p. 206-216 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Autosomal genetic variation is associated with DNA methylation in regions variably escaping X-chromosome inactivation

Luijk, R., Wu, H., Ward-Caviness, C. K., Hannon, E., Carnero-Montoro, E., Min, J. L., Mandaviya, P., Muller-Nurasyid, M., Mei, H., van der Maarel, S. M., Relton, C., Mill, J., Waldenberger, M., Bell, J. T., Jansen, R., Zhernakova, A., Franke, L., 't Hoen, P. A. C., Boomsma, D. I., van Duijn, C. M. & 9 others, van Greevenbroek, M. M. J., Veldink, J. H., Wijmenga, C., van Meurs, J., Daxinger, L., Slagboom, P. E., van Zwet, E. W., Heijmans, B. T. & BIOS Consortium, 14 Sep 2018, In : Nature Communications. 9, 9 p., 3738.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Differentially methylated regions in T cells identify kidney transplant patients at risk for de novo skin cancer

Peters, F. S., Peeters, A. M. A., Mandaviya, P. R., van Meurs, J. B. J., Hofland, L. J., van de Wetering, J., Betjes, M. G. H., Baan, C. C. & Boer, K., 18 Jun 2018, In : Clinical epigenetics. 10, 11 p., 81.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

ESCC ATLAS: A population wide compendium of biomarkers for Esophageal Squamous Cell Carcinoma

Tungekar, A., Mandarthi, S., Mandaviya, P. R., Gadekar, V. P., Tantry, A., Kotian, S., Reddy, J., Prabha, D., Bhat, S., Sahay, S., Mascarenhas, R., Badkillaya, R. R., Nagasampige, M. K., Yelnadu, M., Pawar, H., Hebbar, P. & Kashyap, M. K., 24 Aug 2018, In : Scientific Reports. 8, 1, p. 12715 15 p., 12715.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2017

An epigenome-wide association study meta-analysis of educational attainment

Karlsson Linnér, R., Marioni, R. E., Rietveld, C. A., Simpkin, A. J., Davies, N. M., Watanabe, K., Armstrong, N. J., Auro, K., Baumbach, C., Bonder, M. J., Buchwald, J., Fiorito, G., Ismail, K., Iurato, S., Joensuu, A., Karell, P., Kasela, S., Lahti, J., McRae, A. F., Mandaviya, P. R. & 51 others, Seppälä, I., Wang, Y., Baglietto, L., Binder, E. B., Harris, S. E., Hodge, A. M., Horvath, S., Hurme, M., Johannesson, M., Latvala, A., Mather, K. A., Medland, S. E., Metspalu, A., Milani, L., Milne, R. L., Pattie, A., Pedersen, N. L., Peters, A., Polidoro, S., Räikkönen, K., Severi, G., Starr, J. M., Stolk, L., Waldenberger, M., Eriksson, J. G., Esko, T., Franke, L., Gieger, C., Giles, G. G., Hägg, S., Jousilahti, P., Kaprio, J., Kähönen, M., Lehtimäki, T., Martin, N. G., van Meurs, J. B. C., Ollikainen, M., Perola, M., Posthuma, D., Raitakari, O. T., Sachdev, P. S., Taskesen, E., Uitterlinden, A. G., Vineis, P., Wijmenga, C., Wright, M. J., Relton, C., Davey Smith, G., Deary, I. J., Koellinger, P. D. & Benjamin, D. J., Dec 2017, In : Molecular Psychiatry. 22, 12, p. 1680-1690 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Genetically defined elevated homocysteine levels do not result in widespread changes of DNA methylation in leukocytes

Mandaviya, P. R., Joehanes, R., Aissi, D., Kuehnel, B., Marioni, R. E., Truong, V., Stolk, L., Beekman, M., Bonder, M. J., Franke, L., Gieger, C., Huan, T., Ikram, M. A., Kunze, S., Liang, L., Lindemann, J., Liu, C., McRae, A. F., Mendelson, M. M., Muller-Nurasyid, M. & 19 others, Peters, A., Slagboom, P. E., Starr, J. M., Tregouet, D. -A., Uitterlinden, A. G., van Greevenbroek, M. M. J., van Heemst, D., van Iterson, M., Wells, P. S., Yao, C., Deary, I. J., Gagnon, F., Heijmans, B. T., Levy, D., Morange, P-E., Waldenberger, M., Heil, S. G., van Meurs, J. B. J. & Charge Consortium Epigenetics Grp, 30 Oct 2017, In : PLOS ONE. 12, 10, 19 p., 0182472.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Homocysteine levels associate with subtle changes in leukocyte DNA methylation: an epigenome-wide analysis

Mandaviya, P. R., Aissi, D., Dekkers, K. F., Joehanes, R., Kasela, S., Vinh Truong, Stolk, L., van Heemst, D., Ikram, M. A., Lindemans, J., Slagboom, P. E., Tregouet, D-A., Uitterlinden, A. G., Wei, C., Wells, P., Gagnon, F., van Greevenbroek, M. M. J., Heijmans, B. T., Milani, L., Morange, P-E. & 3 others, van Meurs, J. B. J., Heil, S. G. & BIOS Consortium, Nov 2017, In : Epigenomics. 9, 11, p. 1403-1422 20 p.

Research output: Contribution to journalArticleAcademicpeer-review

2016

Epigenetic Signatures of Cigarette Smoking

Joehanes, R., Just, A. C., Marioni, R. E., Pilling, L. C., Reynolds, L. M., Mandaviya, P. R., Guan, W., Xu, T., Elks, C. E., Aslibekyan, S., Moreno-Macias, H., Smith, J. A., Brody, J. A., Dhingra, R., Yousefi, P., Pankow, J. S., Kunze, S., Shah, S. H., McRae, A. F., Lohman, K. & 63 others, Sha, J., Absher, D. M., Ferrucci, L., Zhao, W., Demerath, E. W., Bressler, J., Grove, M. L., Huan, T., Liu, C., Mendelson, M. M., Yao, C., Kiel, D. P., Peters, A., Wang-Sattler, R., Visscher, P. M., Wray, N. R., Starr, J. M., Ding, J., Rodriguez, C. J., Wareham, N. J., Irvin, M. R., Zhi, D., Barrdahl, M., Vineis, P., Ambatipudi, S., Uitterlinden, A. G., Hofman, A., Schwartz, J., Colicino, E., Hou, L., Vokonas, P. S., Hernandez, D. G., Singleton, A. B., Bandinelli, S., Turner, S. T., Ware, E. B., Smith, A. K., Klengel, T., Binder, E. B., Psaty, B. M., Taylor, K. D., Gharib, S. A., Swenson, B. R., Liang, L., DeMeo, D. L., O'Connor, G. T., Herceg, Z., Ressler, K. J., Conneely, K. N., Sotoodehnia, N., Kardia, S. L. R., Melzer, D., Baccarelli, A. A., van Meurs, J. B. J., Romieu, I., Arnett, D. K., Ong, K. K., Liu, Y., Waldenberger, M., Deary, I. J., Fornage, M., Levy, D. & London, S. J., Oct 2016, In : Circulation : Cardiovascular Genetics. 9, 5, p. 436-447 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

2013

CyTargetLinker: a cytoscape app to integrate regulatory interactions in network analysis

Kutmon, M., Kelder, T., Mandaviya, P., Evelo, C. T. & Coort, S. L., 5 Dec 2013, In : PLOS ONE. 8, 12, 9 p., e82160.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
25 Citations (Scopus)