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Research Output 2014 2019

  • 19 Article
  • 1 Chapter
  • 1 Conference Abstract/Poster in journal
  • 1 Review article
2019

Class-specific depletion of lipid ion signals in tissues upon formalin fixation

Vos, D. R. N., Bowman, A. P., Heeren, R. M. A., Balluff, B. & Ellis, S. R., Dec 2019, In : International Journal of Mass Spectrometry. 446, p. 1-9 9 p., 116212.

Research output: Contribution to journalArticleAcademicpeer-review

Integrative Clustering in Mass Spectrometry Imaging for Enhanced Patient Stratification

Balluff, B., Buck, A., Martin-Lorenzo, M., Dewez, F., Langer, R., McDonnell, L. A., Walch, A. & Heeren, R. M. A., Jan 2019, In : Proteomics Clinical Applications. 13, 1, 5 p., 1800137.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Precise co-registration of mass spectrometry imaging, histology, and laser microdissection-based omics

Dewez, F., Martin-Lorenzo, M., Herfs, M., Baiwir, D., Mazzucchelli, G., De Pauw, E., Heeren, R. M. A. & Balluff, B., Sep 2019, In : Analytical and Bioanalytical Chemistry. 411, 22, p. 5647-5653 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Strategies for managing multi-patient 3D mass spectrometry imaging data

Vos, D. R. N., Jansen, R. L., Lucas, M., Paine, M. R. L., de Boer, O. J., Meijer, S. L., Savci-Heijink, C. D., Marquering, H. A., de Bruin, D. M., Heeren, R. M. A., Ellis, S. R. & Balluff, B., 20 Feb 2019, In : Journal of Proteomics. 193, p. 184-191 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2018

Round robin study of formalin-fixed paraffin-embedded tissues in mass spectrometry imaging

Buck, A., Heijs, B., Beine, B., Schepers, J., Cassese, A., Heeren, R. M. A., McDonnell, L. A., Henkel, C., Walch, A. & Balluff, B., Sep 2018, In : Analytical and Bioanalytical Chemistry. 410, 23, p. 5969–5980 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2017

An experimental guideline for the analysis of histologically heterogeneous tumors by MALDI-TOF mass spectrometry imaging

Lou, S., Balluff, B., Cleven, A. H. G., Bovee, J. V. M. G. & McDonnell, L. A., Jul 2017, In : Biochimica et Biophysica Acta-Proteins and Proteomics. 1865, 7, p. 957-966 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Mass spectrometry imaging for clinical research - latest developments, applications, and current limitations

Vaysse, P-M., Heeren, R. M. A., Porta, T. & Balluff, B., 7 Aug 2017, In : Analyst. 142, 15, p. 2690-2712 23 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Mass Spectrometry Imaging for the Investigation of Intratumor Heterogeneity

Balluff, B., Hanselmann, M. & Heeren, R. M. A., 2017, APPLICATIONS OF MASS SPECTROMETRY IMAGING TO CANCER. Drake, RR. & McDonnell, LA. (eds.). Elsevier Science, p. 201-230 30 p. (Advances in Cancer Research, Vol. 134).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademic

Native glycan fragments detected by MALDI-FT-ICR mass spectrometry imaging impact gastric cancer biology and patient outcome

Kunzke, T., Balluff, B., Feuchtinger, A., Buck, A., Langer, R., Luber, B., Lordick, F., Zitzelsberger, H., Aichler, M. & Walch, A., 15 Sep 2017, In : Oncotarget. 8, 40, p. 68012-68025 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Prognostic Metabolite Biomarkers for Soft Tissue Sarcomas Discovered by Mass Spectrometry Imaging

Lou, S., Balluff, B., Cleven, A. H. G., Bovee, J. V. M. G. & McDonnell, L. A., Feb 2017, In : Journal of the American Society for Mass Spectrometry. 28, 2, p. 376-383 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Visualizing hepatocellular amino acid kinetics through mass spectrometry imaging of stable isotopes

Arts, M., Soons, Z., Dubois, L. J., Pierzchalski, K. A., Ellis, S. R., Balluff, B., Eijkel, G. B., Cramer, T., Lieuwes, N., Agten, S. M., Hackeng, T. M., Van Loon, L. J., Heeren, R. M. & Damink, S. W. O., 2017, In : Journal of Hepatology. 66, 1, p. S43-S44 2 p.

Research output: Contribution to journalConference Abstract/Poster in journalAcademic

2016

Data-driven identification of prognostic tumor subpopulations using spatially mapped t-SNE of mass spectrometry imaging data

Abdelmoula, W. M., Balluff, B., Englert, S., Dijkstra, J., Reinders, M. J. T., Walch, A., McDonnell, L. A. & Lelieveldt, B. P. F., 25 Oct 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 43, p. 12244-12249

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)

High-grade sarcoma diagnosis and prognosis: Biomarker discovery by mass spectrometry imaging

Lou, S., Balluff, B., de Graaff, M. A., Cleven, A. H. G., Briaire-de Bruijn, I., Bovee, J. V. M. G. & McDonnell, L. A., Jun 2016, In : Proteomics. 16, 11-12, p. 1802-1813

Research output: Contribution to journalArticleAcademicpeer-review

8 Citations (Scopus)

High-mass-resolution MALDI mass spectrometry imaging of metabolites from formalin-fixed paraffin-embedded tissue

Ly, A., Buck, A., Balluff, B., Sun, N., Gorzolka, K., Feuchtinger, A., Janssen, K-P., Kuppen, P. J. K., van de Velde, C. J. H., Weirich, G., Erlmeier, F., Langer, R., Aubele, M., Zitzelsberger, H., McDonnell, L., Aichler, M. & Walch, A., Aug 2016, In : Nature Protocols. 11, 8, p. 1428-1443

Research output: Contribution to journalArticleAcademicpeer-review

High nuclear expression of proteasome activator complex subunit 1 predicts poor survival in soft tissue leiomyosarcomas

Lou, S., Cleven, A. H. G., Balluff, B., de Graaff, M., Kostine, M., Briaire-de Bruijn, I., McDonnell, L. A. & Bovee, J. V. M. G., 1 Oct 2016, In : Clinical Sarcoma Research. 6, 17.

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)
1 Citation (Scopus)

More from less: high-throughput dual polarity lipid imaging of biological tissues

Ellis, S. R., Cappell, J., Potocnik, N. O., Balluff, B., Hamaide, J., Van der Linden, A. & Heeren, R. M. A., 2016, In : Analyst. 141, 12, p. 3832-3841

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)

Spatial Autocorrelation in Mass Spectrometry Imaging

Cassese, A., Ellis, S. R., Ogrinc Potocnik, N., Burgermeister, E., Ebert, M., Walch, A., Van Den Maagdenberg, A. M. J. M., McDonnell, L. A., Heeren, R. M. A. & Balluff, B., 7 Jun 2016, In : Analytical Chemistry. 88, 11, p. 5871-5878 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Spectroscopic data handling at petabyte scale

Davies, A. N., Ellis, S., Balluff, B. & Heeren, R., 2016, In : Spectroscopy Europe. 28, 1, p. 15-17

Research output: Contribution to journalArticleProfessional

2015
10 Citations (Scopus)

Discussion point: reporting guidelines for mass spectrometry imaging

McDonnell, L. A., Roempp, A., Balluff, B., Heeren, R. M. A., Albar, J. P., Andren, P. E., Corthals, G. L., Walch, A. & Stoeckli, M., Mar 2015, In : Analytical and Bioanalytical Chemistry. 407, 8, p. 2035-2045

Research output: Contribution to journalArticleAcademicpeer-review

2014
8 Citations (Scopus)

Automatic Generic Registration of Mass Spectrometry Imaging Data to Histology Using Nonlinear Stochastic Embedding

Abdelmoula, W. M., Skraskova, K., Balluff, B., Carreira, R. J., Tolner, E. A., Lelieveldt, B. P. F., van der Maaten, L., Morreau, H., van den Maagdenberg, A. M. J. M., Heeren, R. M. A., McDonnell, L. A. & Dijkstra, J., 16 Sep 2014, In : Analytical Chemistry. 86, 18, p. 9204-9211

Research output: Contribution to journalArticleAcademicpeer-review