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Research Output 2003 2019

2019

Are quality assurance phantoms useful to assess radiomics reproducibility? A multi-center study

Traverso, A., Zhovannik, I., Shi, Z., Kalendralis, P., Monshouwer, R., Starmans, M., Klein, S., Pfaehler, E., Boellaard, R., Dekker, A. & Wee, L., Apr 2019, In : Radiotherapy and Oncology. 133, p. S515-S516 2 p.

Research output: Contribution to journalConference Abstract/Poster in journalAcademic

Big data for better cancer care

Osong, A. B., Dekker, A. & van Soest, J., Jun 2019, In : British Journal of Hospital Medicine. 80, 6, p. 304-305 2 p.

Research output: Contribution to journalEditorialAcademicpeer-review

Burden of disease in children with respiratory tract infections in primary care: diary-based cohort study

Schot, M. J. C., Dekker, A. R. J., van Werkhoven, C. H., van der Velden, A. W., Cals, J. W. L., Broekhuizen, B. D. L., Hopstaken, R. M., de Wit, N. J. & Verheij, T. J. M., Dec 2019, In : Family Practice. 36, 6, p. 723-729 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Can Atlas-Based Auto-Segmentation Ever Be Perfect? Insights From Extreme Value Theory

Schipaanboord, B., Boukerroui, D., Peressutti, D., van Soest, J., Lustberg, T., Kadir, T., Dekker, A., van Elmpt, W. & Gooding, M., Jan 2019, In : Ieee Transactions on Medical Imaging. 38, 1, p. 99-106 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Development and validation of a patient decision aid for prostate Cancer therapy: from paternalistic towards participative shared decision making

Ankolekar, A., Vanneste, B. G. L., Bloemen-van Gurp, E., van Roermund, J. G., van Limbergen, E. J., van de Beek, K., Marcelissen, T., Zambon, V., Oelke, M., Dekker, A., Roumen, C., Lambin, P., Berlanga, A. & Fijten, R., 11 Jul 2019, In : BMC Medical Informatics and Decision Making. 19, 11 p., 130.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Development and Validation of a Prostate Cancer Patient Decision Aid: Towards Participative Medicine

Ankolekar, A., Vanneste, B., Bloemen, E., Van Roermund, J., Van Limbergen, E., Van de Beek, K., Zambon, V., Oelke, M., Dekker, A., Lambin, P., Fijten, R. & Berlanga, A., Apr 2019, In : Radiotherapy and Oncology. 133, p. S450-S451 2 p.

Research output: Contribution to journalConference Abstract/Poster in journalAcademic

Distributed AUC algorithm: a privacy-preserving approach to measure the performance of Cox models

Masciocchi, C., Damiani, A., Capocchiano, N. D., Van Soest, J., Lenkowicz, J., Meldolesi, E., Chiloiro, G., Gambacorta, M. A., Dekker, A. & Valentini, V., 20 May 2019, In : Radiotherapy and Oncology. 133, Supplement 1, p. S1055-S1055 1 p.

Research output: Contribution to journalConference Abstract/Poster in journalAcademic

Open Access
33 Downloads (Pure)

Distributed radiomics as a signature validation study using the Personal Health Train infrastructure

Shi, Z., Ivan Zhovannik, I., Traverso, A., Dankers, F., Deist, T., Kalendralis, P., Monshouwer, R., Bussink, J., Fijten, R., Aerts, H., Dekker, A. & Wee, L., 22 Oct 2019, In : Scientific data. 6, 8 p., 218.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File

Electronic Health Record implementation in a large academic radiotherapy department: Temporarily disruptions but long-term benefits

Jacobs, M., Boersma, L. J., Swart, R., Mannens, R., Reymen, B., Korver, F., van Merode, F. & Dekker, A., Sep 2019, In : International Journal of Medical Informatics. 129, p. 342-348 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

External validation of a prognostic model incorporating quantitative PET image features in oesophageal cancer

Foley, K. G., Shi, Z., Whybra, P., Kalendralis, P., Larue, R., Berbee, M., Sosef, M. N., Parkinson, C., Staffurth, J., Crosby, T. D. L., Roberts, S. A., Dekker, A., Wee, L. & Spezi, E., Apr 2019, In : Radiotherapy and Oncology. 133, p. 205-212 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

External Validation of Radiation-Induced Dyspnea Models on Esophageal Cancer Radiotherapy Patients

Shi, Z., Foley, K. G., de Mey, J. P., Spezi, E., Whybra, P., Crosby, T., van Soest, J., Dekker, A. & Wee, L., 16 Dec 2019, In : Frontiers in Oncology. 9, 9 p., 1411.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Learning from scanners: Bias reduction and feature correction in radiomics

Zhovannik, I., Bussink, J., Traverso, A., Shi, Z., Kalendralis, P., Wee, L., Dekker, A., Fijten, R. & Monshouwer, R., Nov 2019, In : Clinical and Translational Radiation Oncology. 19, p. 33-38 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Machine learning algorithms for outcome prediction in (chemo) radiotherapy: An empirical comparison of classifiers (vol 45, pg 3449, 2018)

Deist, T. M., Dankers, F. J. W. M., Valdes, G., Wijsman, R., Hsu, I-C., Oberije, C., Lustberg, T., van Soest, J., Hoebers, F., Jochems, A., El Naqa, I., Wee, L., Morin, O., Raleigh, D. R., Bots, W., Kaanders, J. H., Belderbos, J., Kwint, M., Solberg, T., Monshouwer, R. & 3 others, Bussink, J., Dekker, A. & Lambin, P., Feb 2019, In : Medical Physics. 46, 2, p. 1080-1087 8 p.

Research output: Contribution to journalErratum / corrigendumAcademic

Multicenter CT phantoms public dataset for radiomics reproducibility tests

Kalendralis, P., Traverso, A., Shi, Z., Zhovannik, I., Monshouwer, R., Starmans, M. P. A., Klein, S., Pfaehler, E., Boellaard, R., Dekker, A. & Wee, L., Mar 2019, In : Medical Physics. 46, 3, p. 1512-1518 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Robust features selection in Apparent Diffusion Coefficient (ADC) maps of cervix cancer patients

Traverso, A., Kazmierski, M., Shi, Z., Weiss, J., Fiset, S., Wee, L., Dekker, A., Jaffray, D. & Han, K., Apr 2019, In : Radiotherapy and Oncology. 133, p. S520-S521 2 p.

Research output: Contribution to journalConference Abstract/Poster in journalAcademic

Stability of radiomic features of apparent diffusion coefficient (ADC) maps for locally advanced rectal cancer in response to image pre-processing

Traverso, A., Kazmierski, M., Shi, Z., Kalendralis, P., Welch, M., Nissen, H. D., Jaffray, D., Dekker, A. & Wee, L., May 2019, In : Physica Medica: European journal of medical physics. 61, p. 44-51 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The need and potential for use of big data for research and development of radiotherapy

Wee, L., Van Soest, J., Bermejo, I., Fijten, R. & Dekker, A., Apr 2019, In : Radiotherapy and Oncology. 133, p. S175-S175 1 p.

Research output: Contribution to journalConference Abstract/Poster in journalAcademic

Towards a modular decision support system for radiomics: A case study on rectal cancer

Gatta, R., Vallati, M., Dinapoli, N., Masciocchi, C., Lenkowicz, J., Cusumano, D., Casa, C., Farchione, A., Damiani, A., van Soest, J., Dekker, A. & Valentini, V., May 2019, In : Artificial Intelligence in Medicine. 96, p. 145-153 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Vulnerabilities of radiomic signature development: The need for safeguards

Welch, M. L., McIntosh, C., Haibe-Kains, B., Milosevic, M. F., Wee, L., Dekker, A., Huang, S. H., Purdie, T. G., O'Sullivan, B., Aerts, H. J. W. L. & Jaffray, D. A., Jan 2019, In : Radiotherapy and Oncology. 130, p. 2-9 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2018

American Association of Physicists in Medicine Task Group 263: Standardizing Nomenclatures in Radiation Oncology

Mayo, C. S., Moran, J. M., Bosch, W., Xiao, Y., McNutt, T., Popple, R., Michalski, J., Feng, M., Marks, L. B., Fuller, C. D., Yorke, E., Palta, J., Gabriel, P. E., Molineu, A., Matuszak, M. M., Covington, E., Masi, K., Richardson, S. L., Ritter, T., Morgas, T. & 32 others, Flampouri, S., Santanam, L., Moore, J. A., Purdie, T. G., Miller, R. C., Hurkmans, C., Adams, J., Wu, Q-R. J., Fox, C. J., Siochi, R. A., Brown, N. L., Verbakel, W., Archambault, Y., Chmura, S. J., Dekker, A. L., Eagle, D. G., Fitzgerald, T. J., Hong, T., Kapoor, R., Lansing, B., Jolly, S., Napolitano, M. E., Percy, J., Rose, M. S., Siddiqui, S., Schadt, C., Simon, W. E., Straube, W. L., St James, S. T., Ulin, K., Yom, S. S. & Yock, T. I., 15 Mar 2018, In : International Journal of Radiation Oncology Biology Physics. 100, 4, p. 1057-1066 10 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

A method to combine target volume data from 3D and 4D planned thoracic radiotherapy patient cohorts for machine learning applications

Johnson, C., Price, G., Khalifa, J., Faivre-Finn, C., Dekker, A., Moore, C. & van Herk, M., 1 Feb 2018, In : Radiotherapy and Oncology. 126, 2, p. 355-361 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Analyzing Partitioned FAIR Health Data Responsibly

Sun, C., Ippel, L., Wouters, B., Soest, J. V., Malic, A., Adekunle, O., Berg, B. V. D., Puts, M., Mussmann, O., Koster, A., Kallen, C. V. D., Townend, D., Dekker, A. & Dumontier, M., 2 Dec 2018, In : arXiv . p. 1-6 6 p.

Research output: Contribution to journalArticleAcademic

A prediction model for early death in non-small cell lung cancer patients following curative-intent chemoradiotherapy

Jochems, A., El-Naqa, I., Kessler, M., Mayo, C. S., Jolly, S., Matuszak, M., Faivre-Finn, C., Price, G., Holloway, L., Vinod, S., Field, M., Barakat, M. S., Thwaites, D., de Ruysscher, D., Dekker, A. & Lambin, P., Feb 2018, In : Acta Oncologica. 57, 2, p. 226-230 5 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Autosegmentation for thoracic radiation treatment planning: A grand challenge at AAPM 2017

Yang, J., Veeraraghavan, H., Armato, S. G., Farahani, K., Kirby, J. S., Kalpathy-Kramer, J., van Elmpt, W., Dekker, A., Han, X., Feng, X., Aljabar, P., Oliveira, B., van der Heyden, B., Zamdborg, L., Lam, D., Gooding, M. & Sharp, G. C., Oct 2018, In : Medical Physics. 45, 10, p. 4568-4581 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Clinical evaluation of atlas and deep learning based automatic contouring for lung cancer

Lustberg, T., van Soest, J., Gooding, M., Peressutti, D., Aljabar, P., van der Stoep, J., van Elmpt, W. & Dekker, A., 1 Feb 2018, In : Radiotherapy and Oncology. 126, 2, p. 312-317 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Comparative evaluation of autocontouring in clinical practice: A practical method using the Turing test

Gooding, M. J., Smith, A. J., Tariq, M., Aljabar, P., Peressutti, D., van der Stoep, J., Reymen, B., Emans, D., Hattu, D., van Loon, J., de Rooy, M., Wanders, R., Peeters, S., Lustberg, T., van Soest, J., Dekker, A. & van Elmpt, W., Nov 2018, In : Medical Physics. 45, 11, p. 5105-5115 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

External validation of an NTCP model for acute esophageal toxicity in locally advanced NSCLC patients treated with intensity-modulated (chemo-)radiotherapy

Dankers, F. J. W. M., Wijsman, R., Troost, E. G. C., Tissing-Tan, C. J. A., Kwint, M. H., Belderbos, J., De Ruysscher, D., Hendriks, L. E., de Geus-Oei, L-F., Rodwell, L., Dekker, A., Monshouwer, R., Hoffmann, A. L. & Bussink, J., Nov 2018, In : Radiotherapy and Oncology. 129, 2, p. 249-256 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Fractal-based radiomic approach to predict complete pathological response after chemo-radiotherapy in rectal cancer

Cusumano, D., Dinapoli, N., Boldrini, L., Chiloiro, G., Gatta, R., Masciocchi, C., Lenkowicz, J., Casa, C., Damiani, A., Azario, L., Van Soest, J., Dekker, A., Lambin, P., De Spirito, M. & Valentini, V., 1 Apr 2018, In : Radiologia medica. 123, 4, p. 286-295 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Machine learning algorithms for outcome prediction in (chemo)radiotherapy: An empirical comparison of classifiers

Deist, T. M., Dankers, F. J. W. M., Valdes, G., Wijsman, R., Hsu, I-C., Oberije, C., Lustberg, T., van Soest, J., Hoebers, F., Jochems, A., El Naqa, I., Wee, L., Morin, O., Raleigh, D. R., Bots, W., Kaanders, J. H., Belderbos, J., Kwint, M., Solberg, T., Monshouwer, R. & 3 others, Bussink, J., Dekker, A. & Lambin, P., 1 Jul 2018, In : Medical Physics. 45, 7, p. 3449-3459 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Machine learning and modeling: Data, validation, communication challenges

El Naqa, I., Ruan, D., Valdes, G., Dekker, A., McNutt, T., Ge, Y., Wu, Q. J., Oh, J. H., Thor, M., Smith, W., Rao, A., Fuller, C., Xiao, Y., Manion, F., Schipper, M., Mayo, C., Moran, J. M. & Ten Haken, R., Oct 2018, In : Medical Physics. 45, 10, p. E834-E840 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Magnetic Resonance, Vendor-independent, Intensity Histogram Analysis Predicting Pathologic Complete Response After Radiochemotherapy of Rectal Cancer

Dinapoli, N., Barbaro, B., Gatta, R., Chiloiro, G., Casa, C., Masciocchi, C., Damiani, A., Boldrini, L., Gambacorta, M. A., Dezio, M., Mattiucci, G. C., Balducci, M., van Soest, J., Dekker, A., Lambin, P., Fiorino, C., Sini, C., De Cobelli, F., Di Muzio, N., Gumina, C. & 3 others, Passoni, P., Manfredi, R. & Valentini, V., 15 Nov 2018, In : International Journal of Radiation Oncology Biology Physics. 102, 4, p. 765-774 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

PRELIMINARY DATA ANALYSIS IN HEALTHCARE MULTICENTRIC DATA MINING: A PRIVACY-PRESERVING DISTRIBUTED APPROACH

Damiani, A., Masciocchi, C., Boldrini, L., Gatta, R., Dinapoli, N., Lenkowicz, J., Chiloiro, G., Gambacorta, M. A., Tagliaferri, L., Autorino, R., Pagliara, M. M., Blasi, M. A., van Soest, J., Dekker, A. & Valentini, V., 1 Jan 2018, In : Journal of E-Learning and Knowledge Society. 14, 1, p. 71-81 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Repeatability and Reproducibility of Radiomic Features: A Systematic Review

Traverso, A., Wee, L., Dekker, A. & Gillies, R., 15 Nov 2018, In : International Journal of Radiation Oncology Biology Physics. 102, 4, p. 1143-1158 16 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
Open Access

The Benefits and Challenges of Using Patient Decision Aids to Support Shared Decision Making in Health Care

Ankolekar, A., Dekker, A., Fijten, R. & Berlanga, A., 9 Nov 2018, In : JCO Clinical Cancer Informatics. 2, p. 1-9 9 p.

Research output: Contribution to journalReview articleAcademicpeer-review

The radiation oncology ontology (ROO): Publishing linked data in radiation oncology using semantic web and ontology techniques

Traverso, A., van Soest, J., Wee, L. & Dekker, A., Oct 2018, In : Medical Physics. 45, 10, p. E854-E862 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Towards a Clinical Decision Support System for External Beam Radiation Oncology Prostate Cancer Patients: Proton vs. Photon Radiotherapy? A Radiobiological Study of Robustness and Stability

Walsh, S., Roelofs, E., Kuess, P., van Wijk, Y., Vanneste, B., Dekker, A., Lambin, P., Jones, B., Georg, D. & Verhaegen, F., 1 Feb 2018, In : Cancers. 10, 2, 16 p., 55.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Treatment data and technical process challenges for practical big data efforts in radiation oncology

Mayo, C. S., Phillips, M., McNutt, T. R., Palta, J., Dekker, A., Miller, R. C., Xiao, Y., Moran, J. M., Matuszak, M. M., Gabriel, P., Ayan, A. S., Prisciandaro, J., Thor, M., Dixit, N., Popple, R., Killoran, J., Kaleba, E., Kantor, M., Ruan, D., Kapoor, R. & 2 others, Kessler, M. L. & Lawrence, T. S., Oct 2018, In : Medical Physics. 45, 10, p. E793-E810 18 p.

Research output: Contribution to journalArticleAcademicpeer-review

Using the Personal Health Train for Automated and Privacy-Preserving Analytics on Vertically Partitioned Data

van Soest, J., Sun, C., Mussmann, O., Puts, M., van den Berg, B., Malic, A., van Oppen, C., Townend, D., Dekker, A. & Dumontier, M., 2018, p. 581-585. 5 p.

Research output: Contribution to conferencePaperAcademic

2017

Big Data in radiation therapy: challenges and opportunities

Lustberg, T., van Soest, J., Jochems, A., Deist, T., van Wijk, Y., Walsh, S., Lambin, P. & Dekker, A., 2017, In : British Journal of Radiology. 90, 1069, 3 p., 20160689.

Research output: Contribution to journalEditorialAcademicpeer-review

Open Access
53 Downloads (Pure)

Decision support systems for personalized and participative radiation oncology

Lambin, P., Zindler, J., Vanneste, B. G. L., Van De Voorde, L., Eekers, D., Compter, I., Panth, K. M., Peerlings, J., Larue, R. T. H. M., Deist, T. M., Jochems, A., Lustberg, T., van Soest, J., de Jong, E. E. C., Even, A. J. G., Reymen, B., Rekers, N., van Gisbergen, M., Roelofs, E., Carvalho, S. & 19 others, Leijenaar, R. T. H., Zegers, C. M. L., Jacobs, M., van Timmeren, J., Brouwers, P., Lal, J. A., Dubois, L., Yaromina, A., Van Limbergen, E. J., Berbee, M., van Elmpt, W., Oberije, C., Ramaekers, B., Dekker, A., Boersma, L. J., Hoebers, F., Smits, K. M., Berlanga, A. J. & Walsh, S., 15 Jan 2017, In : Advanced Drug Delivery Reviews. 109, p. 131-153 23 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
File

Developing and Validating a Survival Prediction Model for NSCLC Patients Through Distributed Learning Across 3 Countries

Jochems, A., Deist, T. M., El Naqa, I., Kessler, M., Mayo, C., Reeves, J., Jolly, S., Matuszak, M., Ten Haken, R., van Soest, J., Oberije, C., Faivre-Finn, C., Price, G., de Ruysscher, D., Lambin, P. & Dekker, A., 1 Oct 2017, In : International Journal of Radiation Oncology Biology Physics. 99, 2, p. 344-352 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Infrastructure and distributed learning methodology for privacy-preserving multi-centric rapid learning health care: euroCAT

Deist, T., Jochems, A., van Soest, J., Nalbantov, G., Oberije, C., Walsh, S., Eble, M., Bulens, P., Coucke, P., Dries, W., Dekker, A. & Lambin, P., Jun 2017, In : Clinical and Translational Radiation Oncology. 4, p. 24-31 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

PRODIGE: PRediction models in prOstate cancer for personalized meDIcine challenGE

Alitto, A. R., Gatta, R., Vanneste, B. G. L., Vallati, M., Meldolesi, E., Damiani, A., Lanzotti, V., Mattiucci, G. C., Frascino, V., Masciocchi, C., Catucci, F., Dekker, A., Lambin, P., Valentini, V. & Mantini, G., Oct 2017, In : Future Oncology. 13, 24, p. 2171-2181 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Prospective validation of pathologic complete response models in rectal cancer: Transferability and reproducibility

van Soest, J., Meldolesi, E., van Stiphout, R., Gatta, R., Damiani, A., Valentini, V., Lambin, P. & Dekker, A., 2017, In : Medical Physics. 44, 9

Research output: Contribution to journalArticleAcademicpeer-review

296 Downloads (Pure)

Radiomics: the bridge between medical imaging and personalized medicine

Lambin, P., Leijenaar, R. T. H., Deist, T. M., Peerlings, J., de Jong, E. E. C., van Timmeren, J., Sanduleanu, S., Larue, R. T. H. M., Even, A. J. G., Jochems, A., van Wijk, Y., Woodruff, H., van Soest, J., Lustberg, T., Roelofs, E., van Elmpt, W., Dekker, A., Mottaghy, F. M., Wildberger, J. E. & Walsh, S., Dec 2017, In : Nature Reviews Clinical Oncology. 14, 12, p. 749-762 14 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
File

The effect of imputing missing clinical attribute values on training lung cancer survival prediction model performance

Barakat, M. S., Field, M., Ghose, A., Stirling, D., Holloway, L., Vinod, S., Dekker, A. & Thwaites, D., 6 Dec 2017, In : Health information science and systems. 5, 11 p., 16.

Research output: Contribution to journalArticleAcademicpeer-review

2016

A topic-centric approach to detecting new evidences for evidence-based medical guidelines

Hu, Q., Huang, Z., Ten Teije, A., Van Harmelen, F., Marshall, M. S. & Dekker, A., 2016, HEALTHINF 2016: 9th International Conference on Health Informatics, Proceedings; Part of 9th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2016. SCITEPRESS, p. 282-289 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference article in proceedingProfessional

7 Citations (Scopus)

Development and evaluation of an online three-level proton vs photon decision support prototype for head and neck cancer - Comparison of dose, toxicity and cost-effectiveness

Cheng, Q., Roelofs, E., Ramaekers, B. L. T., Eekers, D., van Soest, J., Lustberg, T., Hendriks, T., Hoebers, F., van der Laan, H. P., Korevaar, E. W., Dekker, A., Langendijk, J. A. & Lambin, P., Feb 2016, In : Radiotherapy and Oncology. 118, 2, p. 281-285

Research output: Contribution to journalArticleAcademicpeer-review