No photo of Andra Waagmeester
  • Universiteitssingel50, UNS50

    6229 ER Maastricht

    Netherlands

20052019

Research output per year

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Research Output

  • 11 Article
  • 1 Abstract
  • 1 Erratum / corrigendum
  • 1 Comment/Letter to the editor
2019

The FAIR Guiding Principles for scientific data management and stewardship (vol 15, 160018, 2016)

Wilkinson, M. D., Dumontier, M., Aalbersberg, I. J., Appleton, G., Axton, M., Baak, A., Blomberg, N., Boiten, J-W., Santos, L. B. D. S., Bourne, P. E., Bouwman, J., Brookes, A. J., Clark, T., Crosas, M., Dillo, I., Dumon, O., Edmunds, S., Evelo, C. T., Finkers, R., Gonzalez-Beltran, A. & 33 others, Gray, A. J. G., Groth, P., Goble, C., Grethe, J. S., Heringa, J., Hoen, P. A. C. T., Hooft, R., Kuhn, T., Kok, R., Kok, J., Lusher, S. J., Martone, M. E., Mons, A., Packer, A. L., Persson, B., Rocca-Serra, P., Roos, M., van Schaik, R., Sansone, S-A., Schultes, E., Sengstag, T., Slater, T., Strawn, G., Swertz, M. A., Thompson, M., van der Lei, J., van Mulligen, E., Velterop, J., Waagmeester, A., Wittenburg, P., Wolstencroft, K., Zhao, J. & Mons, B., 19 Mar 2019, In : Scientific data. 6, 2 p., 6.

Research output: Contribution to journalErratum / corrigendumAcademic

Open Access
2018

WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research

Slenter, D. N., Kutmon, M., Hanspers, K., Riutta, A., Windsor, J., Nunes, N., Mélius, J., Cirillo, E., Coort, S. L., Digles, D., Ehrhart, F., Giesbertz, P., Kalafati, M., Martens, M., Miller, R., Nishida, K., Rieswijk, L., Waagmeester, A., Eijssen, L. M. T., Evelo, C. T. & 2 others, Pico, A. R. & Willighagen, E. L., 4 Jan 2018, In : Nucleic Acids Research. 46, D1, p. D661-D667 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2016

Comment: The FAIR Guiding Principles for scientific data management and stewardship

Wilkinson, M. D., Dumontier, M., Aalbersberg, IJ. J., Appleton, G., Axton, M., Baak, A., Blomberg, N., Boiten, J-W., Santos, L. B. D. S., Bourne, P. E., Bouwman, J., Brookes, A. J., Clark, T., Crosas, M., Dillo, I., Dumon, O., Edmunds, S., Evelo, C. T., Finkers, R., Gonzalez-Beltran, A. & 33 others, Gray, A. J. G., Groth, P., Goble, C., Grethe, J. S., Heringa, J., 't Hoen, P. A. C., Hooft, R., Kuhn, T., Kok, R., Kok, J., Lusher, S. J., Martone, M. E., Mons, A., Packer, A. L., Persson, B., Rocca-Serra, P., Roos, M., van Schaik, R., Sansone, S-A., Schultes, E., Sengstag, T., Slater, T., Strawn, G., Swertz, M. A., Thompson, M., van der Lei, J., van Mulligen, E., Velterop, J., Waagmeester, A., Wittenburg, P., Wolstencroft, K., Zhao, J. & Mons, B., 15 Mar 2016, In : Scientific data. 3, 9 p., 160018.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
64 Citations (Scopus)

Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources

Waagmeester, A., Kutmon, M., Riutta, A., Miller, R., Willighagen, E. L., Evelo, C. T. & Pico, A. R., Jun 2016, In : PLoS Computational Biology. 12, 6, 11 p., e1004989.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

WikiPathways: capturing the full diversity of pathway knowledge

Kutmon, M., Riutta, A., Nunes, N., Hanspers, K., Willighagen, E. L., Bohler, A., Melius, J., Waagmeester, A., Sinha, S. R., Miller, R., Coort, S. L., Cirillo, E., Smeets, B., Evelo, C. T. & Pico, A. R., 4 Jan 2016, In : Nucleic Acids Research. 44, D1, p. D488-D494 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
37 Citations (Scopus)
2014

Applying linked data approaches to pharmacology: Architectural decisions and implementation

Gray, A. J. G., Groth, P., Loizou, A., Askjaer, S., Brenninkmeijer, C., Burger, K., Chichester, C., Evelo, C. T., Goble, C., Harland, L., Pettifer, S., Thompson, M., Waagmeester, A. & Williams, A. J., 1 Jan 2014, In : Semantic web. 5, 2, p. 101-113 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
17 Citations (Scopus)

The Application of the Open Pharmacological Concepts Triple Store (Open PHACTS) to Support Drug Discovery Research

Ratnam, J., Zdrazil, B., Digles, D., Cuadrado-Rodriguez, E., Neefs, J. M., Tipney, H., Siebes, R., Waagmeester, A., Bradley, G., Chau, C. H., Richter, L., Brea, J., Evelo, C. T., Jacoby, E., Senger, S., Loza, M. I., Ecker, G. F. & Chichester, C., 18 Dec 2014, In : PLOS ONE. 9, 12, 32 p., e115460.

Research output: Contribution to journalArticleAcademicpeer-review

11 Citations (Scopus)
2013

Open PHACTS: Meaningful linking of preclinical drug discovery knowledge

Willighagen, E. L., Brenninkmeijer, C., Evelo, C. T., Harland, L., Gray, A. J. G., Goble, C., Waagmeester, A. S. & Williams, A. J., 1 Jan 2013.

Research output: Contribution to conferenceAbstractAcademic

The ChEMBL database as linked open data

Willighagen, E. L., Waagmeester, A. S., Spjuth, O., Ansell, P., Williams, A. J., Tkachenko, V., Hastings, J., Chen, B. & Wild, D. J., 8 May 2013, In : Journal of Cheminformatics. 5, 1, 12 p., 23.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
32 Citations (Scopus)
2010

Nature Europe site should highlight most productive countries

Evelo, C. T. A. & Waagmeester, A. S., 10 Jun 2010, In : Nature. 465, 7299, p. 685-685 1 p.

Research output: Contribution to journalComment/Letter to the editorAcademicpeer-review

2009

Pathway Enrichment Based on Text Mining and Its Validation on Carotenoid and Vitamin A Metabolism

Waagmeester, A. S., Pezik, P., Coort, S., Tourniaire, F., Evelo, C. & Rebholz Schuhmann, D., 1 Jan 2009, In : OMICS-a journal of Integrative Biology. 13, 5, p. 367-379

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)
2008

The public road to high-quality curated biological pathways

Michiel Adriaens, M. E., Jaillard, M., Waagmeester, A. S., Coort, S. L., Pico, A. R. & Evelo, C. T., 1 Jan 2008, In : Drug Discovery Today. 13, 19-20, p. 856-862

Research output: Contribution to journalArticleAcademicpeer-review

30 Citations (Scopus)

The role of bioinformatics in pathway curation

Waagmeester, A. S., Kelder, T. A. J. & Evelo, C. T., 1 Jan 2008, In : Genes and nutrition. 3, 3-4, p. 139-142

Research output: Contribution to journalArticleAcademicpeer-review

10 Citations (Scopus)
2005

Identifying sigma factors in Mycobacterium smegmatis by comparative genomic analysis

Waagmeester, A. S., Thompson, J. & Reyrat, J-M., 1 Jan 2005, In : Trends in Microbiology. 13, p. 505-509

Research output: Contribution to journalArticleAcademicpeer-review

33 Citations (Scopus)