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Research Output 2002 2019

2019

Characterizing microstructural tissue properties in multiple sclerosis with diffusion MRI at 7 T and 3 T: The impact of the experimental design

De Santis, S., Bastiani, M., Droby, A., Kolber, P., Zipp, F., Pracht, E., Stoecker, T., Groppa, S. & Roebroeck, A., 1 Apr 2019, In : Neuroscience. 403, p. 17-26 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Ex vivo diffusion MRI of the human brain: Technical challenges and recent advances

Roebroeck, A., Miller, K. L. & Aggarwal, M., Apr 2019, In : Nmr in Biomedicine. 32, 4, 14 p., e3941.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Scalable Labeling for Cytoarchitectonic Characterization of Large Optically Cleared Human Neocortex Samples

Hildebrand, S., Schueth, A., Herrler, A., Galuske, R. & Roebroeck, A., 26 Jul 2019, In : Scientific Reports. 9, 1, 10 p., 10880.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The mesoSPIM initiative: open-source light-sheet microscopes for imaging cleared tissue

Voigt, F. F., Kirschenbaum, D., Platonova, E., Pagès, S., Campbell, R. A. A., Kastli, R., Schaettin, M., Egolf, L., van der Bourg, A., Bethge, P., Haenraets, K., Frézel, N., Topilko, T., Perin, P., Hillier, D., Hildebrand, S., Schueth, A., Roebroeck, A., Roska, B., Stoeckli, E. T. & 10 others, Pizzala, R., Renier, N., Zeilhofer, H. U., Karayannis, T., Ziegler, U., Batti, L., Holtmaat, A., Lüscher, C., Aguzzi, A. & Helmchen, F., Nov 2019, In : Nature Methods. 16, 11, p. 1105-1108 4 p.

Research output: Contribution to journalArticleAcademicpeer-review

Ultra-high resolution and multi-shell diffusion MRI of intact ex vivo human brains using kT-dSTEAM at 9.4T

Fritz, F. J., Sengupta, S., Harms, R. L., Tse, D. H. Y., Poser, B. A. & Roebroeck, A., 15 Nov 2019, In : Neuroimage. 202, 15 p., 116087.

Research output: Contribution to journalArticleAcademicpeer-review

2018

Compressed Sensing Diffusion Spectrum Imaging for Accelerated Diffusion Microstructure MRI in Long-Term Population Imaging

Tobisch, A., Stirnberg, R., Harms, R. L., Schultz, T., Roebroeck, A., Breteler, M. M. B. & Stoecker, T., 24 Sep 2018, In : Frontiers in Neuroscience. 12, 19 p., 650.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

High resolution anatomical and quantitative MRI of the entire human occipital lobe ex vivo at 9.4 T

Sengupta, S., Lagos Fritz, F. J., Harms, R. L., Hildebrand, S., Tse, D. H. Y., Poser, B. A., Goebel, R. & Roebroeck, A., Mar 2018, In : Neuroimage. 168, p. 162-171 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

Individualized parcellation of the subthalamic nucleus in patients with Parkinson's disease with 7T MRI

Plantinga, B. R., Temel, Y., Duchin, Y., Uludag, K., Patriat, R., Roebroeck, A., Kuijf, M., Jahanshahi, A., Romenij, B. T. H., Vitekh, J. & Harel, N., Mar 2018, In : Neuroimage. 168, p. 403-411 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Robust and Fast Markov Chain Monte Carlo Sampling of Diffusion MRI Microstructure Models

Harms, R. L. & Roebroeck, A., 18 Dec 2018, In : Frontiers in Neuroinformatics. 12, 18 p., 97.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

SAR and scan-time optimized 3D whole-brain double inversion recovery imaging at 7T

Pracht, E. D., Feiweier, T., Ehses, P., Brenner, D., Roebroeck, A., Weber, B. & Stöcker, T., May 2018, In : Magnetic Resonance in Medicine. 79, 5, p. 2620-2628 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

The impact of field strength on structural network organization: a comparative study between 3T and 7T in multiple sclerosis patients

Muthuraman, M., Gonzalez-Escamilla, G., Fleischer, V., Koirala, N., de Santis, S., Roebroeck, A., Goebel, R., Droby, A. & Groppa, S., Oct 2018, In : Multiple Sclerosis Journal. 24, S2, p. 859-860 2 p., EP1618.

Research output: Contribution to journalConference Abstract/Poster in journalAcademic

2017

A "kissing lesion": In-vivo 7T evidence of meningeal inflammation in early multiple sclerosis

Kolber, P., Droby, A., Roebroeck, A., Goebel, R., Fleischer, V., Groppa, S. & Zipp, F., 1 Jul 2017, In : Multiple Sclerosis Journal. 23, 8, p. 1167-1169 3 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

Differential Time Course of Microstructural White Matter in Patients With Psychotic Disorder and Individuals at Risk: A 3-Year Follow-up Study

Domen, P., Peeters, S., Michielse, S., Gronenschild, E., Viechtbauer, W., Roebroeck, A., Os, J. V. & Marcelis, M., Jan 2017, In : Schizophrenia Bulletin. 43, 1, p. 160-170 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

On the importance of modeling fMRI transients when estimating effective connectivity: a dynamic causal modeling study using ASL data

Havlicek, M., Roebroeck, A., Friston, K. J., Gardumi, A., Ivanov, D. & Uludag, K., Jul 2017, In : Neuroimage. 155, p. 217-233 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

Robust and fast nonlinear optimization of diffusion MRI microstructure models

Harms, R. L., Lagos Fritz, F., Tobisch, A., Goebel, R. & Roebroeck, A., 15 Jul 2017, In : Neuroimage. 155, p. 82-96 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2016
206 Downloads (Pure)

A Specialized Multi-Transmit Head Coil for High Resolution fMRI of the Human Visual Cortex at 7T

Sengupta, S., Roebroeck, A., Kemper, V. G., Poser, B. A., Zimmermann, J., Goebel, R. & Adriany, G., 2 Dec 2016, In : PLOS ONE. 11, 12, 22 p., 0165418.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
1 Citation (Scopus)
134 Downloads (Pure)

Assessing Microstructural Substrates of White Matter Abnormalities: A Comparative Study Using DTI and NODDI

Timmers, I., Roebroeck, A., Bastiani, M., Jansma, B., Rubio-Gozalbo, E. & Zhang, H., 21 Dec 2016, In : PLOS ONE. 11, 12, 15 p., e0167884.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
136 Downloads (Pure)

Automatic Segmentation of Human Cortical Layer-Complexes and Architectural Areas Using Ex vivo Diffusion MRI and Its Validation

Bastiani, M., Oros-Peusquens, A-M., Seehaus, A., Brenner, D., Mollenhoff, K., Celik, A., Felder, J., Bratzke, H., Shah, N. J., Galuske, R., Goebel, R. & Roebroeck, A., 10 Nov 2016, In : Frontiers in Neuroscience. 10, 487.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
6 Citations (Scopus)
226 Downloads (Pure)

Including diffusion time dependence in the extra-axonal space improves in vivo estimates of axonal diameter and density in human white matter

de Santis, S., Jones, D. K. & Roebroeck, A., 15 Apr 2016, In : Neuroimage. 130, p. 91-103

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
3 Citations (Scopus)
84 Downloads (Pure)

T-1 relaxometry of crossing fibres in the human brain

de Santis, S., Assaf, Y., Jeurissen, B., Jones, D. K. & Roebroeck, A., Nov 2016, In : Neuroimage. 141, p. 133-142 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
1 Citation (Scopus)
324 Downloads (Pure)

Ultra-High Field MRI Post Mortem Structural Connectivity of the Human Subthalamic Nucleus, Substantia Nigra, and Globus Pallidus

Plantinga, B., Roebroeck, A., Kemper, V. G., Uludag, K., Melse, M., Mai, J., Kuijf, M., Herrler, A., Jahanshahi, A., Romeny, B. M. T. H. & Temel, Y., 16 Jun 2016, In : Frontiers in Neuroanatomy. 10, 10 p., 066.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
2 Citations (Scopus)
140 Downloads (Pure)

White matter microstructural changes in adolescent anorexia nervosa including an exploratory longitudinal study

Vogel, K., Timmers, I., Kumar, V., Nickl-Jockschat, T., Bastiani, M., Roebroeck, A., Herpertz-Dahlmann, B., Konrad, K., Goebel, R. & Seitz, J., Apr 2016, In : NeuroImage: Clinical. 11, p. 614-621 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
File
2015

Environmental influences on cerebral dysconnectivity: a longitudinal family-based DTI study in psychotic disorder

Marcelis, M., Domen, P., Michielse, S., Gronenschild, E., Peeters, S., Roebroeck, A. & van Os, J., 1 Jan 2015, In : Biological Psychiatry. 77, 9

Research output: Contribution to journalArticleAcademicpeer-review

9 Citations (Scopus)

Histological validation of high-resolution DTI in human post mortem tissue

Seehaus, A., Roebroeck, A., Bastiani, M., Fonseca, L., Bratzke, H., Lori, N., Vilanova, A., Goebel, R. & Galuske, R., 23 Jul 2015, In : Frontiers in Neuroanatomy. 9, 12 p., 98.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)

Neural predictors of chocolate intake following chocolate exposure

Frankort, A., Roefs, A., Siep, N., Roebroeck, A., Havermans, R. & Jansen, A., 1 Apr 2015, In : Appetite. 87, p. 98-107 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

8 Citations (Scopus)

Physiologically informed dynamic causal modeling of fMRI data

Havlicek, M., Roebroeck, A., Friston, K., Gardumi, A., Ivanov, D. & Uludag, K., 15 Nov 2015, In : Neuroimage. 122, p. 355-372

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)

The When and Where of Working Memory Dysfunction in Early-Onset Schizophrenia: A Functional Magnetic Resonance Imaging Study

Bittner, R. A., Linden, D. E. J., Roebroeck, A., Härtling, F., Rotarska-Jagiela, A., Maurer, K., Goebel, R., Singer, W. & Haenschel, C., Sep 2015, In : Cerebral Cortex. 25, 9, p. 2494-2506 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)

Unraveling the multiscale structural organization and connectivity of the human brain: the role of diffusion MRI

Bastiani, M. & Roebroeck, A., 9 Jun 2015, In : Frontiers in Neuroanatomy. 9, 15 p., 77.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
15 Citations (Scopus)

White matter microstructure pathology in classic galactosemia revealed by neurite orientation dispersion and density imaging

Timmers, I., Zhang, H., Bastiani, M., Jansma, B. M., Roebroeck, A. & Rubio-Gozalbo, M. E., 1 Jan 2015, In : Journal of Inherited Metabolic Disease. 38, 2, p. 295-304

Research output: Contribution to journalArticleAcademicpeer-review

2014
5 Citations (Scopus)

A network analysis of audiovisual affective speech perception

Jansma, H., Roebroeck, A. & Münte, T. F., 3 Jan 2014, In : Neuroscience. 256, p. 230-241 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Assessing microstructural substrates of white matter abnormalities using NODDI : application to a metabolic disease

Timmers, I., Roebroeck, A., Bastiani, M., Jansma, B. M., Rubio-Gozalbo, M. E. & Zhang, H., 1 Jan 2014.

Research output: Contribution to conferencePosterAcademic

19 Citations (Scopus)

Comparative analysis of the macroscale structural connectivity in the macaque and human brain

Goulas, A., Bastiani, M., Bezgin, G., Uylings, H. B. M., Roebroeck, A. & Stiers, P., Mar 2014, In : PLoS Computational Biology. 10, 3, 15 p., e1003529.

Research output: Contribution to journalArticleAcademicpeer-review

20 Citations (Scopus)

General overview on the merits of multimodal neuroimaging data fusion

Uludag, K. & Roebroeck, A., 15 Nov 2014, In : Neuroimage. 102, 1, p. 3-10 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

11 Citations (Scopus)

The craving stops before you feel it: neural correlates of chocolate craving during cue exposure with response prevention

Frankort, A., Roefs, A., Siep, N., Roebroeck, A., Havermans, R. & Jansen, A., Jun 2014, In : Cerebral Cortex. 24, 6, p. 1589-1600 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

16 Citations (Scopus)

TMS affects moral judgment, showing the role of DLPFC and TPJ in cognitive and emotional processing

Jeurissen, D., Sack, A. T., Roebroeck, A., Russ, B. E. & Pascual-Leone, A., 1 Jan 2014, In : Frontiers in Neuroscience. 8, 18.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

Ultra-high field magnetic resonance imaging of the basal ganglia and related structures

Plantinga, B. R., Temel, Y., Roebroeck, A., Uludag, K., Ivanov, D., Kuijf, M. L. & Ter Haar Romenij, B. M., 5 Nov 2014, In : Frontiers in Human Neuroscience. 8, 22 p., 876.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2013
36 Citations (Scopus)

Histological Validation of DW-MRI Tractography in Human Postmortem Tissue

Seehaus, A., Roebroeck, A. F., Chiry, O., Kim, D. S., Ronen, I., Bratzke, H., Goebel, R. W. & Galuske, R. A., 1 Jan 2013, In : Cerebral Cortex. 23, 2, p. 442-450

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)

Microstructural white matter alterations in psychotic disorder: A family-based diffusion tensor imaging study

Domen, P. A. E., Michielse, S., Gronenschild, E., Habets, P., Roebroeck, A., Schruers, K., van Os, J. & Marcelis, M., May 2013, In : Schizophrenia Research. 146, 1-3, p. 291-300

Research output: Contribution to journalArticleAcademicpeer-review

Neural Correlates Of Chocolate Craving During Cue Exposure With Response Prevention (Cerp) With Chocolate

Frankort, A., Roefs, A. J., Siep, N., Roebroeck, A. F., Havermans, R. C. & Jansen, A. T. M., 1 Jan 2013, p. 217-217.

Research output: Contribution to conferenceAbstractAcademic

2012
46 Citations (Scopus)

A short history of causal modeling of fMRI data

Stephan, K. E. & Roebroeck, A., 15 Aug 2012, In : Neuroimage. 62, 2, p. 856-863 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

73 Citations (Scopus)

Human cortical connectome reconstruction from diffusion weighted MRI: The effect of tractography algorithm

Bastiani, M., Shah, N. J., Goebel, R. & Roebroeck, A., Sep 2012, In : Neuroimage. 62, 3, p. 1732-1749 18 p.

Research output: Contribution to journalArticleAcademicpeer-review

20 Citations (Scopus)

Integration of "what" and "where" in frontal cortex during visual imagery of scenes

de Borst, A. W., Sack, A. T., Jansma, B. M., Esposito, F., de Martino, F., Valente, G., Roebroeck, A., Di Salle, F., Goebel, R. & Formisano, E., Mar 2012, In : Neuroimage. 60, 1, p. 47-58 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)

Network-based statistics for a community driven transparent publication process

Zimmermann, J., Roebroeck, A., Uludag, K., Sack, A. T., Formisano, E., Jansma, B., de Weerd, P. & Goebel, R., 5 Mar 2012, In : Frontiers in Computational Neuroscience. 6, 5 p., 11.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
24 Citations (Scopus)

Reward activity in satiated overweight women is decreased during unbiased viewing but increased when imagining taste: an event-related fMRI study

Frankort, A. A. C., Roefs, A. J., Siep, N., Roebroeck, A. F., Havermans, R. C. & Jansen, A. T. M., May 2012, In : International Journal of Obesity. 36, 5, p. 627-637 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

2011

Causal Time Series Analysis of functional Magnetic Resonance Imaging Data

Roebroeck, A. F., Seth, A. K. & Valdes-Sosa, P. A., 1 Jan 2011, In : Journal of Machine Learning Research. 12, p. 65-94

Research output: Contribution to journalArticleAcademicpeer-review

149 Citations (Scopus)

Effective connectivity: Influence, causality and biophysical modeling

Valdes-Sosa, P. A., Roebroeck, A. F., Daunizeau, J. & Friston, K., 1 Jan 2011, In : Neuroimage. 58, 2, p. 339-361

Research output: Contribution to journalArticleAcademicpeer-review

11 Citations (Scopus)