Research Output

2020

A 7 Tesla fMRI investigation of human tinnitus percept in cortical and subcortical auditory areas

Berlot, E., Arts, R., Smit, J., George, E., Gulban, O. F., Moerel, M., Stokroos, R., Formisano, E. & De Martino, F., 2020, In : NeuroImage: Clinical. 25, 11 p., 102166.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Adipose tissue in health and disease through the lens of its building blocks

Lenz, M., Arts, I. C. W., Peeters, R. L. M., de Kok, T. M. & Ertaylan, G., 26 Jun 2020, In : Scientific Reports. 10, 1, 14 p., 10433.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A dynamical model of the laminar BOLD response

Havlicek, M. & Uludag, K., 1 Jan 2020, In : Neuroimage. 204, 21 p., 116209.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Audiovisual and lexical cues do not additively enhance perceptual adaptation

Ullas, S., Formisano, E., Eisner, F. & Cutler, A., 2020, In : Psychonomic Bulletin & Review. 27, p. 707–715 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Behavioral effects of rhythm, carrier frequency and temporal cueing on the perception of sound sequences

Heynckes, M., De Weerd, P., Valente, G., Formisano, E. & De Martino, F., 5 Jun 2020, In : PLOS ONE. 15, 6, 17 p., 0234251.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Brain-Based Binary Communication Using Spatiotemporal Features of fNIRS Responses

Nagels-Coune, L., Benitez-Andonegui, A., Reuter, N., Lührs, M., Goebel, R., De Weerd, P., Riecke, L. & Sorger, B., 15 Apr 2020, In : Frontiers in Human Neuroscience. 14, 20 p., 113.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Conformal Feature-Selection Wrappers and ensembles for negative-transfer avoidance

Zhou, S., Smirnov, E., Schoenmakers, G., Peeters, R. & Wu, X., 15 Jul 2020, In : Neurocomputing. 397, p. 309-319 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms

Ostaszewski, M., Mazein, A., Gillespie, M. E., Kuperstein, I., Niarakis, A., Hermjakob, H., Pico, A. R., Willighagen, E. L., Evelo, C. T., Hasenauer, J., Schreiber, F., Dräger, A., Demir, E., Wolkenhauer, O., Furlong, L. I., Barillot, E., Dopazo, J., Orta-resendiz, A., Messina, F., Valencia, A. & 5 others, Funahashi, A., Kitano, H., Auffray, C., Balling, R. & Schneider, R., 5 May 2020, In : Scientific data. 7, 1, 4 p., 136.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Open Access

Dynamic time-locking mechanism in the cortical representation of spoken words

Nora, A., Faisal, A., Seol, J., Renvall, H., Formisano, E. & Salmelin, R., 8 Jun 2020, In : eNeuro.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Effects of synaptic and myelin plasticity on learning in a network of Kuramoto phase oscillators (vol 29, 083122, 2019)

Karimian, M., Dibenedetto, D., Moerel, M., Burwick, T., Westra, R. L., De Weerd, P. & Senden, M., Jun 2020, In : Chaos. 30, 6, 1 p., 069902.

Research output: Contribution to journalArticleAcademicpeer-review

EFMviz: A COBRA Toolbox extension to visualize Elementary Flux Modes in Genome-Scale Metabolic Models

Sarathy, C., Kutmon, M., Lenz, M., Adriaens, M. E., Evelo, C. T. & Arts, I. C. W., 12 Feb 2020, In : Metabolites. 10, 2, 14 p., 66.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Feedback contribution to surface motion perception in the human early visual cortex

Marquardt, I., De Weerd, P., Schneider, M., Gulban, O. F., Ivanov, D., Wang, Y. & Uludağ, K., 4 Jun 2020, In : Elife. 9, 28 p., e50933.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Fitter Mitochondria Are Associated With Radioresistance in Human Head and Neck SQD9 Cancer Cells

Grasso, D., Medeiros, H. C. D., Zampieri, L. X., Bol, V., Danhier, P., van Gisbergen, M. W., Bouzin, C., Brusa, D., Gregoire, V., Smeets, H., Stassen, A. P. M., Dubois, L. J., Lambin, P., Dutreix, M. & Sonveaux, P., 13 Mar 2020, In : Frontiers in Pharmacology. 11, 16 p., 263.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

GAT-1 (rs2697153) and GAT-3 (rs2272400) polymorphisms are associated with febrile seizures and temporal lobe epilepsy

Schijns, O. E. M. G., Bisschop, J., Rijkers, K., Dings, J., Vanherle, S., Lindsey, P., Smeets, H. J. M. & Hoogland, G., Apr 2020, In : Epileptic Disorders. 22, 2, p. 176-182 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Heterogeneous Domain Adaptation for IHC Classification of Breast Cancer Subtypes

Ismailoglu, F., Cavill, R., Smirnov, E., Zhou, S., Collins, P. & Peeters, R., Feb 2020, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 17, 1, p. 347-353 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

High-density lipoprotein cholesterol efflux capacity is not associated with atherosclerosis and prevalence of cardiovascular outcome: The CODAM study

Josefs, T., Wouters, K., Tietge, U. J. F., Annema, W., Dullaart, R. P. F., Vaisar, T., Arts, I. C. W., van der Kallen, C. J. H., Stehouwer, C. D. A., Schalkwijk, C. G., Goldberg, I. J., Fisher, E. A. & van Greevenbroek, M. M. J., 2020, In : Journal of Clinical Lipidology. 14, 1, p. 122-132.e4 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

Hippocampal-striatal functional connectivity supports processing of temporal expectations from associative memory

van de Ven, V., Lee, C., Lifanov, J., Kochs, S., Jansma, H. & De Weerd, P., 10 Apr 2020, In : Hippocampus.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Interfering with a memory without erasing its trace

Lange, G., Senden, M., Radermachere, A. & De Weerd, P., Jan 2020, In : Neural Networks. 121, p. 339-355 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

Interleaved lexical and audiovisual information can retune phoneme boundaries

Ullas, S., Formisano, E., Eisner, F. & Cutler, A., May 2020, In : Attention Perception & Psychophysics. 82, 4, p. 2018-2026 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Interneuron hypomyelination is associated with cognitive inflexibility in a rat model of schizophrenia

Maas, D. A., Eijsink, V. D., Spoelder, M., van Hulten, J. A., De Weerd, P., Homberg, J. R., Vallès, A., Nait-Oumesmar, B. & Martens, G. J. M., 11 May 2020, In : Nature Communications. 11, 1, 2329.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Layer-dependent functional connectivity methods

Huber, L., Finn, E. S., Chai, Y., Goebel, R., Stirnberg, R., Stöcker, T., Marrett, S., Uludag, K., Kim, S. G., Han, S., Bandettini, P. A. & Poser, B. A., 5 Jun 2020, In : Progress in Neurobiology. 101835.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Lexical and audiovisual bases of perceptual adaptation in speech

Ullas, S., 2020, Ipskamp Printing BV. 160 p.

Research output: ThesisDoctoral ThesisInternal

Open Access
File
108 Downloads (Pure)

Metabolic profiling of tissue-specific insulin resistance in human obesity: results from the Diogenes study and the Maastricht Study

DiOGenes Consortium, Jun 2020, In : International Journal of Obesity. 44, 6, p. 1376-1386 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Modeling the Lipid Metabolism of a Genetically Minimal Cell

Bianchi, D. M., Breuer, M., Lam, V., Poddar, A., Wise, K. S., Hutchison, C. A., Smith, H. O., Villa, E., Ha, T., Glass, J. I. & Luthey-Schulten, Z., 7 Feb 2020, In : Biophysical Journal. 118, 3, p. 346A-346A 1 p.

Research output: Contribution to journalConference Abstract/Poster in journalAcademic

Modelling molecular processes in weight loss: Regulation of metabolic flexibility

Tareen, S. H. K., 2020, Maastricht: Maastricht University. 158 p.

Research output: ThesisDoctoral ThesisInternal

Open Access
File
77 Downloads (Pure)

Modelling the Genetic Information Processes of a Genetically Minimal Cell

Thornburg, Z. R., Melo, M. C. D. R., Bianchi, D., Brier, T. A., Breuer, M., Smith, H. O., Hutichison, C. A., Glass, J. I. & Luthey-Schulten, Z., 7 Feb 2020, In : Biophysical Journal. 118, 3, p. 461A-461A 1 p.

Research output: Contribution to journalConference Abstract/Poster in journalAcademic

Modelling the Nucleotide Metabolic Network of a Genetically Minimal Cell

Brier, T. A., Bianchi, D., Thornburg, Z. R., Melo, M. C. D. R., Breuer, M., Wise, K. S., Smith, H. O., Hutchison, C. A., Glass, J. I. & Luthey-Schulten, Z., 7 Feb 2020, In : Biophysical Journal. 118, 3, p. 460A-461A 2 p.

Research output: Contribution to journalConference Abstract/Poster in journalAcademic

Open Access
File
55 Downloads (Pure)

Neural Correlates of Phonetic Adaptation as Induced by Lexical and Audiovisual Context

Ullas, S., Hausfeld, L., Cutler, A., Eisner, F. & Formisano, E., 14 Jul 2020, In : Journal of Cognitive Neuroscience. p. 1-14 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

On Agent-Based Models of Sex, Plants and Sustainability

Schüller, K., 2020, Maastricht: Maastricht University.

Research output: ThesisDoctoral ThesisInternal

Open Access
File
87 Downloads (Pure)

Phase-dependent amplification of working memory content and performance

Ten Oever, S., De Weerd, P. & Sack, A. T., 14 Apr 2020, In : Nature Communications. 11, 1, 8 p., 1832.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Reorganization of sound location processing in the auditory cortex of blind humans

van der Heijden, K., Formisano, E., Valente, G., Zhan, M., Kupers, R. & de Gelder, B., Mar 2020, In : Cerebral Cortex. 30, 3, p. 1103–1116 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Special Issue on Conformal and Probabilistic Prediction with Applications

Gammerman, A., Vovk, V., Luo, Z., Smirnov, E. & Peeters, R., 15 Jul 2020, In : Neurocomputing. 397, p. 264-265 2 p.

Research output: Contribution to journalEditorialAcademicpeer-review

Spectro-Temporal Processing in a Two-Stream Computational Model of Auditory Cortex

Zulfiqar, I., Moerel, M. & Formisano, E., 22 Jan 2020, In : Frontiers in Computational Neuroscience. 13, 18 p., 95.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Open Access

TfamKnockdown Results in Reduction of mtDNA Copy Number, OXPHOS Deficiency and Abnormalities in Zebrafish Embryos

Otten, A. B. C., Kamps, R., Lindsey, P., Gerards, M., Pendeville-Samain, H., Muller, M., van Tienen, F. H. J. & Smeets, H. J. M., 12 Jun 2020, In : Frontiers in Cell and Developmental Biology. 8, 11 p., 381.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, Netherlands, 2017/18 influenza season

Schneider, P. P., Spreeuwenberg, P., Hooiveld, M., Donker, G. A., Barnett, D. J. & Paget, J., 28 May 2020, In : Eurosurveillance. 25, 21, p. 13-22 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

White matter structure and myelin-related gene expression alterations with experience in adult rats

Sampaio-Baptista, C., Vallès, A., Khrapitchev, A. A., Akkermans, G., Winkler, A. M., Foxley, S., Sibson, N. R., Roberts, M., Miller, K., Diamond, M. E., Martens, G. J. M., De Weerd, P. & Johansen-Berg, H., Apr 2020, In : Progress in Neurobiology. 187, 13 p., 101770.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2019

243rd ENMC international workshop: Developing guidelines for management of reproductive options for families with maternally inherited mtDNA disease, Amsterdam, the Netherlands, 22-24 March 2019

Poulton, J., Steffann, J., Burgstaller, J., McFarland, R., Arbeithuber, B., Bengoa, J., Burgstaller, J., Chan, S., Chiaratti, M., Crouch, M., Dimond, R., Enriques, J. A., Gorman, G., Hyslop, L., Johnston, I., Kitto, J., Maguire, A., McFarland, R., Mitalipov, S., Otterloo, V. & 12 others, Poulton, J., Sallevelt, S., Smeets, H., Spits, C., St John, J., Steffann, J., Stewart, J., Stoneking, M., Thorburn, D., van der Veer, E., Wells, D. & Workshop Participants, Sep 2019, In : Neuromuscular Disorders. 29, 9, p. 725-733 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

A bioinformatics workflow to decipher transcriptomic data from vitamin D studies

Muñoz García, A., Eijssen, L. M., Kutmon, M., Sarathy, C., Cengo, A., Hewison, M., Evelo, C. T., Lenz, M. & Coort, S. L., May 2019, In : Journal of Steroid Biochemistry and Molecular Biology. 189, p. 28-35 8 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Accelerated estimation and permutation inference for ACE modeling

Chen, X., Formisano, E., Blokland, G. A. M., Strike, L. T., McMahon, K. L., de Zubicaray, G. I., Thompson, P. M., Wright, M. J., Winkler, A. M., Ge, T. & Nichols, T. E., 15 Aug 2019, In : Human Brain Mapping. 40, 12, p. 3488-3507 20 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A Co-expression Analysis of the Placental Transcriptome in Association With Maternal Pre-pregnancy BMI and Newborn Birth Weight

Cox, B., Tsamou, M., Vrijens, K., Neven, K. Y., Winckelmans, E., de Kok, T. M., Plusquin, M. & Nawrot, T. S., 29 Apr 2019, In : Frontiers in Genetics. 10, p. 1-13 13 p., 354.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A computational model of postprandial adipose tissue lipid metabolism derived using human arteriovenous stable isotope tracer data

O'Donovan, S. D., Lenz, M., Vink, R. G., Roumans, N. J. T., de Kok, T. M. C. M., Mariman, E. C. M., Peeters, R. L. M., van Riel, N. A. W., van Baak, M. A. & Arts, I. C. W., Oct 2019, In : PLoS Computational Biology. 15, 10, 23 p., e1007400.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Acute MI Detection Derived From ECG Parameters Distribution

Aranda Hernandez, A. R., Karel, J., Bonizzi, P. & Peeters, R., 2019, Computing in Cardiology (CinC). Vol. 46. 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference article in proceedingAcademicpeer-review

Open Access